Conservation of cofitness between b2945 and b3787 in Escherichia coli BW25113

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2945 endA DNA-specific endonuclease I (NCBI) 1.0 b3787 rffD UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) 0.48 10
Escherichia coli BL21 1.00 ECD_02775 DNA-specific endonuclease I 1.00 ECD_03665 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase low > 60
Escherichia coli ECOR27 1.00 NOLOHH_11155 endA deoxyribonuclease I 1.00 NOLOHH_06700 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 57
Escherichia coli ECRC62 1.00 BNILDI_09735 endA deoxyribonuclease I 1.00 BNILDI_04825 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00773 Endonuclease-1 1.00 OHPLBJKB_04267 UDP-N-acetyl-D-mannosamine dehydrogenase low > 73
Escherichia coli ECOR38 1.00 HEPCGN_18590 endA deoxyribonuclease I 1.00 HEPCGN_13275 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 85
Escherichia coli ECRC102 0.99 NIAGMN_17050 endA deoxyribonuclease I 1.00 NIAGMN_12320 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia coli ECRC99 0.99 KEDOAH_08855 endA deoxyribonuclease I 1.00 KEDOAH_13585 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia coli ECRC101 0.99 MCAODC_09805 endA deoxyribonuclease I 1.00 MCAODC_05070 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia coli ECRC98 0.99 JDDGAC_22915 endA deoxyribonuclease I 1.00 JDDGAC_18190 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia fergusonii Becca 0.99 EFB2_00957 Endonuclease-1 0.99 EFB2_04852 UDP-N-acetyl-D-mannosamine dehydrogenase low > 86
Escherichia coli ECRC101 0.99 OKFHMN_19285 endA deoxyribonuclease I 1.00 OKFHMN_14565 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS16385 deoxyribonuclease I 0.99 ECOLIN_RS21740 UDP-N-acetyl-D-mannosamine dehydrogenase low > 52
Enterobacter asburiae PDN3 0.88 EX28DRAFT_2983 Endonuclease I 0.89 EX28DRAFT_4457 nucleotide sugar dehydrogenase low > 76
Enterobacter sp. TBS_079 0.88 MPMX20_03803 Endonuclease-1 0.89 MPMX20_04486 UDP-N-acetyl-D-mannosamine dehydrogenase low > 85
Klebsiella michiganensis M5al 0.86 BWI76_RS24065 deoxyribonuclease I 0.89 BWI76_RS01095 UDP-N-acetyl-D-mannosamine dehydrogenase 0.20 83
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3047 Endonuclease I precursor (EC 3.1.21.1) @ Extracellular deoxyribonuclease Dns (EC 3.1.21.-) 0.87 GFF2886 UDP-glucose dehydrogenase (EC 1.1.1.22) low > 78
Dickeya dianthicola ME23 0.79 DZA65_RS19620 deoxyribonuclease I 0.70 DZA65_RS21240 UDP-N-acetyl-D-mannosamine dehydrogenase low > 75
Dickeya dadantii 3937 0.79 DDA3937_RS18550 deoxyribonuclease I 0.71 DDA3937_RS20050 UDP-N-acetyl-D-mannosamine dehydrogenase low > 74
Dickeya dianthicola 67-19 0.78 HGI48_RS18485 deoxyribonuclease I 0.68 HGI48_RS20195 UDP-N-acetyl-D-mannosamine dehydrogenase low > 71
Rahnella sp. WP5 0.76 EX31_RS02655 deoxyribonuclease I 0.81 EX31_RS15070 UDP-N-acetyl-D-mannosamine dehydrogenase low > 89
Pectobacterium carotovorum WPP14 0.76 HER17_RS02645 deoxyribonuclease I 0.82 HER17_RS01160 UDP-N-acetyl-D-mannosamine dehydrogenase low > 75
Pantoea sp. MT58 0.75 IAI47_03625 deoxyribonuclease I 0.74 IAI47_18505 UDP-N-acetyl-D-mannosamine dehydrogenase low > 76
Serratia liquefaciens MT49 0.73 IAI46_21380 deoxyribonuclease I 0.84 IAI46_00605 UDP-N-acetyl-D-mannosamine dehydrogenase low > 86
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_02500 deoxyribonuclease 0.63 CSW01_04710 UDP-N-acetyl-D-mannosamine dehydrogenase low > 62
Shewanella oneidensis MR-1 0.55 SO0833 endA endonuclease I (NCBI ptt file) 0.18 SO3190 polysaccharide biosynthesis protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.54 Sama_0576 deoxyribonuclease I (RefSeq) 0.16 Sama_2260 UDP-glucose/GDP-mannose dehydrogenase (RefSeq) low > 62
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_2148 Deoxyribonuclease I 0.15 Psyr_2696 UDP-glucose 6-dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_2148 Deoxyribonuclease I 0.15 Psyr_2696 UDP-glucose 6-dehydrogenase low > 86
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_3916 Endonuclease I precursor (EC 3.1.21.1) 0.72 PfGW456L13_3996 UDP-glucose dehydrogenase (EC 1.1.1.22) low > 87
Pseudomonas sp. RS175 0.46 PFR28_02739 Extracellular deoxyribonuclease 0.69 PFR28_00917 UDP-N-acetyl-D-mannosamine dehydrogenase low > 88
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_6039 Endonuclease I precursor (EC 3.1.21.1) 0.18 Pf1N1B4_5884 UDP-glucose dehydrogenase (EC 1.1.1.22) low > 87
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_00985 deoxyribonuclease 0.25 AO356_03420 UDP-N-acetyl-D-glucosamine dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_158 Endonuclease I precursor (EC 3.1.21.1) 0.19 Pf6N2E2_125 UDP-glucose dehydrogenase (EC 1.1.1.22) low > 103
Pseudomonas sp. S08-1 0.45 OH686_20125 Endonuclease I precursor 0.67 OH686_14390 UDP-N-acetyl-D-mannosamine dehydrogenase low > 80

Not shown: 7 genomes with orthologs for b2945 only; 43 genomes with orthologs for b3787 only