Conservation of cofitness between b2810 and b3778 in Escherichia coli BW25113

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2810 csdA cysteine sulfinate desulfinase (NCBI) 1.0 b3778 rep DNA helicase and single-stranded DNA-dependent ATPase (NCBI) 0.34 7
Escherichia coli BL21 1.00 ECD_02661 cysteine sulfinate desulfinase 1.00 ECD_03656 DNA helicase and single-stranded DNA-dependent ATPase — —
Escherichia coli ECRC62 1.00 BNILDI_10490 csdA cysteine desulfurase CsdA 1.00 BNILDI_04780 rep DNA helicase Rep — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00921 Cysteine desulfurase CsdA 1.00 OHPLBJKB_04276 ATP-dependent DNA helicase Rep low > 73
Escherichia coli ECOR38 0.99 HEPCGN_19360 csdA cysteine desulfurase CsdA 1.00 HEPCGN_13320 rep DNA helicase Rep low > 85
Escherichia coli ECRC101 0.99 MCAODC_10630 csdA cysteine desulfurase CsdA 0.99 MCAODC_05115 rep DNA helicase Rep — —
Escherichia coli ECRC99 0.99 KEDOAH_08025 csdA cysteine desulfurase CsdA 0.99 KEDOAH_13540 rep DNA helicase Rep — —
Escherichia coli ECRC102 0.99 NIAGMN_17875 csdA cysteine desulfurase CsdA 0.99 NIAGMN_12365 rep DNA helicase Rep — —
Escherichia coli ECRC98 0.99 JDDGAC_23770 csdA cysteine desulfurase CsdA 0.99 JDDGAC_18230 rep DNA helicase Rep — —
Escherichia coli ECRC101 0.99 OKFHMN_20105 csdA cysteine desulfurase CsdA 0.99 OKFHMN_14610 rep DNA helicase Rep — —
Escherichia coli ECOR27 0.99 NOLOHH_11985 csdA cysteine desulfurase CsdA 1.00 NOLOHH_06745 rep DNA helicase Rep — —
Escherichia fergusonii Becca 0.98 EFB2_01107 Cysteine desulfurase CsdA 0.97 EFB2_04860 ATP-dependent DNA helicase Rep — —
Escherichia coli Nissle 1917 0.98 ECOLIN_RS15660 cysteine desulfurase CsdA 0.99 ECOLIN_RS21690 DNA helicase Rep low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF4867 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA 0.96 GFF2894 ATP-dependent DNA helicase Rep — —
Enterobacter asburiae PDN3 0.86 EX28DRAFT_2886 cysteine desulfurase, catalytic subunit CsdA 0.93 EX28DRAFT_4449 ATP-dependent DNA helicase Rep (EC 3.6.1.-) — —
Enterobacter sp. TBS_079 0.85 MPMX20_03673 Cysteine desulfurase CsdA 0.94 MPMX20_04494 ATP-dependent DNA helicase Rep — —
Klebsiella michiganensis M5al 0.82 BWI76_RS22965 cysteine sulfinate desulfinase 0.93 BWI76_RS01020 DNA helicase Rep — —
Pantoea sp. MT58 0.73 IAI47_04015 cysteine desulfurase CsdA 0.85 IAI47_18545 DNA helicase Rep — —
Serratia liquefaciens MT49 0.71 IAI46_20350 cysteine desulfurase CsdA 0.87 IAI46_00565 DNA helicase Rep — —
Pectobacterium carotovorum WPP14 0.70 HER17_RS16425 cysteine desulfurase CsdA 0.87 HER17_RS01120 DNA helicase Rep — —
Erwinia tracheiphila SCR3 0.69 LU632_RS06240 csdA cysteine desulfurase CsdA 0.86 LU632_RS24280 rep DNA helicase Rep — —
Rahnella sp. WP5 0.67 EX31_RS13120 cysteine desulfurase CsdA 0.85 EX31_RS15030 DNA helicase Rep — —
Dickeya dadantii 3937 0.66 DDA3937_RS05040 cysteine desulfurase CsdA 0.87 DDA3937_RS20105 DNA helicase Rep — —
Dickeya dianthicola 67-19 0.66 HGI48_RS05045 cysteine desulfurase CsdA 0.85 HGI48_RS20245 DNA helicase Rep — —
Dickeya dianthicola ME23 0.65 DZA65_RS05385 cysteine desulfurase CsdA 0.85 DZA65_RS21290 DNA helicase Rep — —
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_11740 cysteine desulfurase CsdA 0.71 CSW01_00865 DNA helicase Rep — —
Pseudomonas putida KT2440 0.39 PP_1529 Probable cysteine desulfurase 0.52 PP_5264 helicase a single-stranded DNA dependent ATPase — —
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_3076 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA 0.52 Pf1N1B4_2151 ATP-dependent DNA helicase Rep — —
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_4717 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA 0.52 PfGW456L13_819 ATP-dependent DNA helicase Rep — —
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS06240 cysteine desulfurase 0.52 PFLU_RS29345 DNA helicase Rep — —
Pseudomonas fluorescens SBW25 0.38 PFLU_RS06240 cysteine desulfurase 0.52 PFLU_RS29345 DNA helicase Rep — —
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_1335 Aminotransferase, class V 0.53 Psyr_0075 ATP-dependent DNA helicase Rep — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_1335 Aminotransferase, class V 0.53 Psyr_0075 ATP-dependent DNA helicase Rep — —
Pseudomonas stutzeri RCH2 0.37 Psest_1464 Selenocysteine lyase 0.52 Psest_3778 ATP-dependent DNA helicase Rep — —
Pseudomonas simiae WCS417 0.37 PS417_06175 cysteine sulfinate desulfinase 0.52 PS417_27670 ATP-dependent DNA helicase Rep — —
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_3079 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA 0.52 Pf6N2E2_4398 ATP-dependent DNA helicase Rep — —
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_06075 cysteine sulfinate desulfinase 0.52 AO356_12655 ATP-dependent DNA helicase Rep — —
Pseudomonas sp. RS175 0.36 PFR28_00389 Cysteine desulfurase SufS 0.51 PFR28_04392 ATP-dependent DNA helicase Rep — —

Not shown: 0 genomes with orthologs for b2810 only; 33 genomes with orthologs for b3778 only