Conservation of cofitness between b3693 and b4095 in Escherichia coli BW25113

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3693 dgoK 2-oxo-3-deoxygalactonate kinase (NCBI) 1.0 b4095 phnM carbon-phosphorus lyase complex subunit (NCBI) 0.20 5
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00009 putative 2-dehydro-3-deoxygalactonokinase DgoK1 0.98 OHPLBJKB_03949 Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase low > 73
Escherichia coli BL21 0.99 ECD_03577 2-oxo-3-deoxygalactonate kinase 1.00 ECD_03967 ribophosphonate triphosphate hydrolase 0.26 60
Escherichia coli ECRC62 0.98 BNILDI_04330 dgoK 2-dehydro-3-deoxygalactonokinase 0.98 BNILDI_06555 phnM alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase — —
Escherichia coli ECOR27 0.93 NOLOHH_07200 dgoK 2-dehydro-3-deoxygalactonokinase 0.98 NOLOHH_04940 phnM alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase low > 57
Escherichia coli Nissle 1917 0.93 ECOLIN_RS21275 2-dehydro-3-deoxygalactonokinase 0.97 ECOLIN_RS23715 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase low > 52
Escherichia coli ECOR38 0.93 HEPCGN_13765 dgoK 2-dehydro-3-deoxygalactonokinase 0.98 HEPCGN_11310 phnM alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase low > 85
Escherichia fergusonii Becca 0.92 EFB2_00009 putative 2-dehydro-3-deoxygalactonokinase DgoK1 0.98 EFB2_04487 Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase low > 86
Enterobacter asburiae PDN3 0.81 EX28DRAFT_3981 2-keto-3-deoxy-galactonokinase 0.91 EX28DRAFT_4210 phosphonate metabolism protein PhnM low > 76
Enterobacter sp. TBS_079 0.79 MPMX20_00009 putative 2-dehydro-3-deoxygalactonokinase DgoK1 0.90 MPMX20_00315 Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase low > 85
Klebsiella michiganensis M5al 0.74 BWI76_RS27945 2-oxo-3-deoxygalactonate kinase 0.85 BWI76_RS02195 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase low > 92
Pantoea sp. MT58 0.53 IAI47_00035 2-dehydro-3-deoxygalactonokinase 0.72 IAI47_07785 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase low > 76
Dickeya dianthicola ME23 0.52 DZA65_RS07275 2-dehydro-3-deoxygalactonokinase 0.71 DZA65_RS07985 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase low > 75
Dickeya dianthicola 67-19 0.52 HGI48_RS06930 2-dehydro-3-deoxygalactonokinase 0.71 HGI48_RS07480 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase low > 71
Rahnella sp. WP5 0.49 EX31_RS10330 2-dehydro-3-deoxygalactonokinase 0.76 EX31_RS08440 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase low > 89
Serratia liquefaciens MT49 0.28 IAI46_03175 2-dehydro-3-deoxygalactonokinase 0.76 IAI46_02075 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase low > 86
Dinoroseobacter shibae DFL-12 0.25 Dshi_1242 2-dehydro-3-deoxygalactonokinase (RefSeq) 0.15 Dshi_2917 amidohydrolase (RefSeq) low > 64
Rhizobium sp. OAE497 0.25 ABIE40_RS05270 2-dehydro-3-deoxygalactonokinase 0.44 ABIE40_RS00510 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase low > 107
Variovorax sp. SCN45 0.25 GFF6771 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) 0.43 GFF6255 Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase (EC 3.6.1.63) 0.47 13
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS27110 2-dehydro-3-deoxygalactonokinase 0.39 QEN71_RS14230 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase low > 153
Sinorhizobium meliloti 1021 0.24 SMc00881 2-dehydro-3-deoxygalactonokinase 0.43 SM_b21171 enzyme protein low > 103
Burkholderia phytofirmans PsJN 0.24 BPHYT_RS16950 2-dehydro-3-deoxygalactonokinase DgoK (EC 2.7.1.58) (from data) 0.40 BPHYT_RS29490 phosphonate metabolism protein PhnM — —
Pseudomonas fluorescens SBW25 0.23 PFLU_RS00150 2-dehydro-3-deoxygalactonokinase 0.50 PFLU_RS08790 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase low > 109
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS00150 2-dehydro-3-deoxygalactonokinase 0.50 PFLU_RS08790 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase low > 109
Agrobacterium fabrum C58 0.23 Atu0704 2-dehydro-3-deoxygalactonate kinase 0.44 Atu0169 hypothetical protein low > 89
Phaeobacter inhibens DSM 17395 0.23 PGA1_c07360 2-dehydro-3-deoxygalactonokinase DgoK 0.32 PGA1_c04320 protein PhnM low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_1987 2-keto-3-deoxygalactonate kinase 0.52 Psyr_2257 Amidohydrolase low > 86
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_1987 2-keto-3-deoxygalactonate kinase 0.52 Psyr_2257 Amidohydrolase low > 86
Bosea sp. OAE506 0.20 ABIE41_RS03750 2-dehydro-3-deoxygalactonokinase 0.38 ABIE41_RS07660 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase low > 77
Acidovorax sp. GW101-3H11 0.20 Ac3H11_602 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) 0.43 Ac3H11_4548 Metal-dependent hydrolase involved in phosphonate metabolism low > 79

Not shown: 20 genomes with orthologs for b3693 only; 15 genomes with orthologs for b4095 only