Conservation of cofitness between b0678 and b4013 in Escherichia coli BW25113

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0678 nagB glucosamine-6-phosphate deaminase (NCBI) 1.0 b4013 metA homoserine O-succinyltransferase (NCBI) 0.33 13
Escherichia coli ECRC98 1.00 JDDGAC_10810 nagB glucosamine-6-phosphate deaminase 0.99 JDDGAC_16900 metA homoserine O-succinyltransferase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03037 Glucosamine-6-phosphate deaminase 0.99 OHPLBJKB_04037 Homoserine O-succinyltransferase low > 73
Escherichia coli ECRC100 1.00 OKFHMN_07160 nagB glucosamine-6-phosphate deaminase 0.99 OKFHMN_13275 metA homoserine O-succinyltransferase low > 80
Escherichia coli BL21 1.00 ECD_00635 glucosamine-6-phosphate deaminase 1.00 ECD_03885 homoserine O-transsuccinylase low > 61
Escherichia coli ECRC101 1.00 MCAODC_26375 nagB glucosamine-6-phosphate deaminase 0.99 MCAODC_03775 metA homoserine O-succinyltransferase low > 87
Escherichia coli ECRC62 1.00 BNILDI_21545 nagB glucosamine-6-phosphate deaminase 0.99 BNILDI_06100 metA homoserine O-succinyltransferase low > 75
Escherichia coli ECOR27 1.00 NOLOHH_23540 nagB glucosamine-6-phosphate deaminase 0.99 NOLOHH_05420 metA homoserine O-succinyltransferase low > 75
Escherichia coli ECRC102 1.00 NIAGMN_05215 nagB glucosamine-6-phosphate deaminase 0.99 NIAGMN_11025 metA homoserine O-succinyltransferase
Escherichia coli ECRC99 1.00 KEDOAH_20810 nagB glucosamine-6-phosphate deaminase 0.99 KEDOAH_14885 metA homoserine O-succinyltransferase
Escherichia coli ECOR38 1.00 HEPCGN_01070 nagB glucosamine-6-phosphate deaminase 0.99 HEPCGN_11915 metA homoserine O-succinyltransferase low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS03620 glucosamine-6-phosphate deaminase 0.99 ECOLIN_RS25515 homoserine O-succinyltransferase
Escherichia fergusonii Becca 0.99 EFB2_03425 Glucosamine-6-phosphate deaminase 0.99 EFB2_04597 Homoserine O-succinyltransferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF4586 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) 0.95 GFF1350 Homoserine O-succinyltransferase (EC 2.3.1.46) low > 78
Klebsiella michiganensis M5al 0.95 BWI76_RS08215 glucosamine-6-phosphate deaminase 0.95 BWI76_RS01655 homoserine O-succinyltransferase low > 92
Enterobacter sp. TBS_079 0.95 MPMX20_01324 Glucosamine-6-phosphate deaminase 0.94 MPMX20_00230 Homoserine O-succinyltransferase low > 85
Enterobacter asburiae PDN3 0.95 EX28DRAFT_2297 glucosamine-6-phosphate isomerase 0.94 EX28DRAFT_4331 homoserine O-succinyltransferase (EC 2.3.1.46) low > 76
Pantoea sp. MT58 0.87 IAI47_13880 glucosamine-6-phosphate deaminase 0.85 IAI47_18015 homoserine O-succinyltransferase low > 76
Rahnella sp. WP5 0.86 EX31_RS23265 glucosamine-6-phosphate deaminase 0.82 EX31_RS11735 homoserine O-succinyltransferase low > 89
Erwinia tracheiphila SCR3 0.85 LU632_RS16245 nagB glucosamine-6-phosphate deaminase 0.87 LU632_RS22410 metA homoserine O-succinyltransferase
Serratia liquefaciens MT49 0.84 IAI46_06090 glucosamine-6-phosphate deaminase 0.84 IAI46_23200 homoserine O-succinyltransferase low > 86
Pectobacterium carotovorum WPP14 0.82 HER17_RS15105 glucosamine-6-phosphate deaminase 0.85 HER17_RS02285 homoserine O-succinyltransferase low > 75
Vibrio cholerae E7946 ATCC 55056 0.82 CSW01_19215 glucosamine-6-phosphate deaminase 0.66 CSW01_08100 homoserine O-succinyltransferase low > 62
Dickeya dadantii 3937 0.81 DDA3937_RS06310 glucosamine-6-phosphate deaminase 0.83 DDA3937_RS19065 homoserine O-succinyltransferase low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS06355 glucosamine-6-phosphate deaminase 0.83 HGI48_RS19155 homoserine O-succinyltransferase low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS06700 glucosamine-6-phosphate deaminase 0.83 DZA65_RS20275 homoserine O-succinyltransferase low > 75
Bacteroides thetaiotaomicron VPI-5482 0.66 BT4127 glucosamine-6-phosphate isomerase (NCBI ptt file) 0.51 BT2413 homoserine O-succinyltransferase (NCBI ptt file)
Bacteroides ovatus ATCC 8483 0.65 BACOVA_04936 glucosamine-6-phosphate deaminase 0.51 BACOVA_03007 homoserine O-succinyltransferase
Bacteroides stercoris CC31F 0.64 HMPREF1181_RS08765 glucosamine-6-phosphate deaminase 0.49 HMPREF1181_RS00105 homoserine O-succinyltransferase
Parabacteroides merdae CL09T00C40 0.63 HMPREF1078_RS11650 glucosamine-6-phosphate deaminase 0.48 HMPREF1078_RS10000 homoserine O-succinyltransferase
Phocaeicola vulgatus CL09T03C04 0.63 HMPREF1058_RS07305 glucosamine-6-phosphate deaminase 0.50 HMPREF1058_RS14680 homoserine O-succinyltransferase
Phocaeicola dorei CL03T12C01 0.63 ABI39_RS21205 glucosamine-6-phosphate deaminase 0.49 ABI39_RS10360 homoserine O-succinyltransferase
Shewanella loihica PV-4 0.38 Shew_0815 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (from data) 0.57 Shew_2551 homoserine O-succinyltransferase (RefSeq) low > 60
Bifidobacterium breve UCC2003 0.33 BBR_RS16865 glucosamine-6-phosphate deaminase 0.42 BBR_RS11990 homoserine O-succinyltransferase low > 34
Synechococcus elongatus PCC 7942 0.20 Synpcc7942_1103 glucosamine-6-phosphate isomerase 2 0.44 Synpcc7942_0371 metA homoserine O-succinyltransferase low > 38

Not shown: 3 genomes with orthologs for b0678 only; 11 genomes with orthologs for b4013 only