Conservation of cofitness between b1479 and b3412 in Escherichia coli BW25113

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1479 sfcA NAD-linked malate dehydrogenase (malic enzyme) (VIMSS) 1.0 b3412 bioH carboxylesterase of pimeloyl-CoA synthesis (NCBI) 0.31 4
Escherichia coli BL21 1.00 ECD_01437 malate dehydrogenase, decarboxylating, NAD-requiring; malic enzyme 1.00 ECD_03264 pimeloyl-ACP methyl ester carboxylesterase — —
Escherichia coli ECOR27 1.00 NOLOHH_19035 maeA malate dehydrogenase 0.99 NOLOHH_08785 bioH pimeloyl-ACP methyl ester esterase BioH — —
Escherichia coli ECRC62 1.00 BNILDI_17520 maeA malate dehydrogenase 1.00 BNILDI_02730 bioH pimeloyl-ACP methyl ester esterase BioH — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02238 NAD-dependent malic enzyme 1.00 OHPLBJKB_00291 Pimeloyl-[acyl-carrier protein] methyl ester esterase low > 73
Escherichia fergusonii Becca 1.00 EFB2_02512 NAD-dependent malic enzyme 0.98 EFB2_00416 Pimeloyl-[acyl-carrier protein] methyl ester esterase low > 86
Escherichia coli ECOR38 1.00 HEPCGN_26435 maeA malate dehydrogenase 0.98 HEPCGN_15810 bioH pimeloyl-ACP methyl ester esterase BioH low > 85
Escherichia coli ECRC98 0.99 JDDGAC_03850 maeA malate dehydrogenase 0.97 JDDGAC_20630 bioH pimeloyl-ACP methyl ester esterase BioH — —
Escherichia coli ECRC101 0.99 OKFHMN_01360 maeA malate dehydrogenase 0.97 OKFHMN_17000 bioH pimeloyl-ACP methyl ester esterase BioH — —
Escherichia coli ECRC99 0.99 KEDOAH_27080 maeA malate dehydrogenase 0.97 KEDOAH_11140 bioH pimeloyl-ACP methyl ester esterase BioH — —
Escherichia coli ECRC102 0.99 NIAGMN_25490 maeA malate dehydrogenase 0.97 NIAGMN_14770 bioH pimeloyl-ACP methyl ester esterase BioH — —
Escherichia coli ECRC101 0.99 MCAODC_16580 maeA malate dehydrogenase 0.97 MCAODC_07530 bioH pimeloyl-ACP methyl ester esterase BioH — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS08525 malate dehydrogenase 0.98 ECOLIN_RS19490 pimeloyl-ACP methyl ester esterase BioH — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2556 NAD-dependent malic enzyme (EC 1.1.1.38) 0.78 GFF605 Biotin synthesis protein BioH low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_1103 Malic enzyme 0.82 EX28DRAFT_4130 pimelyl-[acyl-carrier protein] methyl ester esterase low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_02369 NAD-dependent malic enzyme 0.83 MPMX20_04299 Pimeloyl-[acyl-carrier protein] methyl ester esterase low > 85
Klebsiella michiganensis M5al 0.86 BWI76_RS13830 NAD-dependent malic enzyme 0.78 BWI76_RS26630 pimeloyl-[acyl-carrier protein] methyl ester esterase low > 92
Pectobacterium carotovorum WPP14 0.77 HER17_RS13490 NAD-dependent malic enzyme 0.70 HER17_RS01555 pimeloyl-ACP methyl ester esterase BioH low > 75
Pantoea sp. MT58 0.77 IAI47_06755 NAD-dependent malic enzyme 0.62 IAI47_01790 pimeloyl-ACP methyl ester esterase BioH low > 76
Erwinia tracheiphila SCR3 0.76 LU632_RS08550 NAD-dependent malic enzyme 0.65 LU632_RS22975 bioH pimeloyl-ACP methyl ester esterase BioH — —
Serratia liquefaciens MT49 0.75 IAI46_07935 NAD-dependent malic enzyme 0.67 IAI46_23825 pimeloyl-ACP methyl ester esterase BioH low > 86
Dickeya dianthicola ME23 0.75 DZA65_RS08935 NAD-dependent malic enzyme 0.64 DZA65_RS20865 pimeloyl-ACP methyl ester esterase BioH low > 75
Dickeya dianthicola 67-19 0.75 HGI48_RS08645 NAD-dependent malic enzyme 0.64 HGI48_RS19775 pimeloyl-ACP methyl ester esterase BioH — —
Dickeya dadantii 3937 0.75 DDA3937_RS08480 NAD-dependent malic enzyme 0.64 DDA3937_RS19645 pimeloyl-ACP methyl ester esterase BioH low > 74
Rahnella sp. WP5 0.75 EX31_RS18665 NAD-dependent malic enzyme 0.68 EX31_RS04915 pimeloyl-ACP methyl ester esterase BioH low > 89
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_06015 NAD-dependent malic enzyme 0.52 CSW01_13715 pimeloyl-[acyl-carrier protein] methyl ester esterase low > 62
Shewanella oneidensis MR-1 0.68 SO3855 sfcA malate oxidoreductase (NCBI ptt file) 0.40 SO4626 bioH bioH protein (NCBI ptt file) 0.25 63
Shewanella sp. ANA-3 0.67 Shewana3_0750 malate dehydrogenase (RefSeq) 0.43 Shewana3_4010 bioH protein (RefSeq) — —
Shewanella loihica PV-4 0.67 Shew_2962 malate dehydrogenase (RefSeq) 0.43 Shew_3630 bioH protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.67 Sama_2621 malate dehydrogenase (RefSeq) 0.43 Sama_3505 bioH protein (RefSeq) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_1561 NAD-dependent malic enzyme 0.19 Psyr_4685 bioH protein — —
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_1561 NAD-dependent malic enzyme 0.19 Psyr_4685 bioH protein — —
Alteromonas macleodii MIT1002 0.64 MIT1002_00455 NAD-dependent malic enzyme 0.41 MIT1002_04016 Pimelyl-[acyl-carrier protein] methyl ester esterase low > 70
Ralstonia solanacearum PSI07 0.35 RPSI07_RS13995 NAD-dependent malic enzyme 0.10 RPSI07_RS22690 3-oxoadipate enol-lactonase low > 81
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_00026 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) 0.11 H281DRAFT_05864 Pimeloyl-ACP methyl ester carboxylesterase low > 103

Not shown: 3 genomes with orthologs for b1479 only; 31 genomes with orthologs for b3412 only