Conservation of cofitness between b0124 and b2989 in Escherichia coli BW25113

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0124 gcd glucose dehydrogenase (NCBI) 1.0 b2989 b2989 orf, hypothetical protein (VIMSS) 0.23 14
Escherichia coli ECRC101 1.00 OKFHMN_10450 gcd quinoprotein glucose dehydrogenase 1.00 OKFHMN_19050 yghU glutathione-dependent disulfide-bond oxidoreductase — —
Escherichia coli ECRC102 1.00 NIAGMN_08300 gcd quinoprotein glucose dehydrogenase 1.00 NIAGMN_16815 yghU glutathione-dependent disulfide-bond oxidoreductase — —
Escherichia coli ECRC101 1.00 MCAODC_00965 gcd quinoprotein glucose dehydrogenase 1.00 MCAODC_09565 yghU glutathione-dependent disulfide-bond oxidoreductase — —
Escherichia coli BL21 1.00 ECD_00123 glucose dehydrogenase 1.00 ECD_02865 putative S-transferase low > 60
Escherichia coli ECRC99 1.00 KEDOAH_17705 gcd quinoprotein glucose dehydrogenase 1.00 KEDOAH_09095 yghU glutathione-dependent disulfide-bond oxidoreductase — —
Escherichia coli ECRC98 1.00 JDDGAC_14045 gcd quinoprotein glucose dehydrogenase 1.00 JDDGAC_22685 yghU glutathione-dependent disulfide-bond oxidoreductase — —
Escherichia coli ECRC62 1.00 BNILDI_08815 gcd quinoprotein glucose dehydrogenase 1.00 BNILDI_00685 yghU glutathione-dependent disulfide-bond oxidoreductase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03537 Quinoprotein glucose dehydrogenase 1.00 OHPLBJKB_00710 Disulfide-bond oxidoreductase YghU low > 73
Escherichia coli ECOR27 1.00 NOLOHH_02795 gcd quinoprotein glucose dehydrogenase 1.00 NOLOHH_10830 yghU glutathione-dependent disulfide-bond oxidoreductase low > 57
Escherichia coli ECOR38 1.00 HEPCGN_08430 gcd quinoprotein glucose dehydrogenase 1.00 HEPCGN_17905 yghU glutathione-dependent disulfide-bond oxidoreductase low > 85
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00690 quinoprotein glucose dehydrogenase 0.99 ECOLIN_RS17225 glutathione-dependent disulfide-bond oxidoreductase low > 52
Escherichia fergusonii Becca 1.00 EFB2_03921 Quinoprotein glucose dehydrogenase 1.00 EFB2_00818 Disulfide-bond oxidoreductase YghU low > 86
Klebsiella michiganensis M5al 0.89 BWI76_RS04950 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 0.81 BWI76_RS24255 thiol:disulfide oxidoreductase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF104 Glucose dehydrogenase, PQQ-dependent (EC 1.1.5.2) 0.93 GFF3098 Uncharacterized GST-like protein yghU associated with glutathionylspermidine synthetase/amidase low > 78
Enterobacter asburiae PDN3 0.89 EX28DRAFT_3721 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 0.84 EX28DRAFT_3028 Glutathione S-transferase low > 76
Enterobacter sp. TBS_079 0.88 MPMX20_00818 Quinoprotein glucose dehydrogenase 0.85 MPMX20_03842 Disulfide-bond oxidoreductase YghU low > 85
Pantoea sp. MT58 0.73 IAI47_17585 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase 0.77 IAI47_17505 glutathione-dependent disulfide-bond oxidoreductase low > 76
Rahnella sp. WP5 0.71 EX31_RS00275 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase 0.76 EX31_RS19830 glutathione-dependent disulfide-bond oxidoreductase low > 89
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS08325 glucose dehydrogenase 0.72 BPHYT_RS25630 glutathione S-transferase low > 109
Agrobacterium fabrum C58 0.47 Atu4135 glucose dehydrogenase 0.72 Atu3585 glutathione S-transferase low > 89
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_17600 glucose dehydrogenase 0.68 AO356_23350 S-transferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_5442 Glucose dehydrogenase, PQQ-dependent (EC 1.1.5.2) 0.68 Pf6N2E2_1619 Glutathione S-transferase (EC 2.5.1.18) low > 103
Pseudomonas simiae WCS417 0.45 PS417_05300 glucose dehydrogenase 0.67 PS417_11065 S-transferase low > 88
Pseudomonas sp. RS175 0.45 PFR28_03503 Quinoprotein glucose dehydrogenase 0.70 PFR28_01980 Disulfide-bond oxidoreductase YghU low > 88
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS05385 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase 0.66 PFLU_RS11695 glutathione-dependent disulfide-bond oxidoreductase low > 109
Pseudomonas fluorescens SBW25 0.45 PFLU_RS05385 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase 0.66 PFLU_RS11695 glutathione-dependent disulfide-bond oxidoreductase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_3930 quinoprotein glucose dehydrogenase 0.68 Psyr_0609 Glutathione S-transferase, C-terminal low > 86
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_3930 quinoprotein glucose dehydrogenase 0.68 Psyr_0609 Glutathione S-transferase, C-terminal low > 86
Pseudomonas stutzeri RCH2 0.44 Psest_2914 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 0.67 Psest_0056 Glutathione S-transferase 0.43 5
Pseudomonas putida KT2440 0.44 PP_1444 quinoprotein glucose dehydrogenase 0.68 PP_2933 GSH-dependent disulfide bond oxidoreductase low > 96
Rhizobium sp. OAE497 0.43 ABIE40_RS04735 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase 0.70 ABIE40_RS23945 glutathione-dependent disulfide-bond oxidoreductase low > 107
Variovorax sp. SCN45 0.37 GFF4425 Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.5.8) 0.69 GFF811 Glutathione S-transferase (EC 2.5.1.18) low > 127
Dinoroseobacter shibae DFL-12 0.33 Dshi_2294 Pyrrolo-quinoline quinone (RefSeq) 0.68 Dshi_1932 hypothetical protein (RefSeq) low > 64

Not shown: 13 genomes with orthologs for b0124 only; 12 genomes with orthologs for b2989 only