Conservation of cofitness between b1033 and b2945 in Escherichia coli BW25113

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1033 ycdW putative dehydrogenase (VIMSS) 1.0 b2945 endA DNA-specific endonuclease I (NCBI) 0.19 13
Escherichia coli ECOR27 1.00 NOLOHH_21410 ghrA glyoxylate/hydroxypyruvate reductase GhrA 1.00 NOLOHH_11155 endA deoxyribonuclease I low > 57
Escherichia coli ECRC62 1.00 BNILDI_19570 ghrA glyoxylate/hydroxypyruvate reductase GhrA 1.00 BNILDI_09735 endA deoxyribonuclease I — —
Escherichia coli BL21 1.00 ECD_01030 glyoxylate/hydroxypyruvate reductase A 1.00 ECD_02775 DNA-specific endonuclease I — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02633 Glyoxylate/hydroxypyruvate reductase A 1.00 OHPLBJKB_00773 Endonuclease-1 low > 73
Escherichia fergusonii Becca 0.99 EFB2_02940 Glyoxylate/hydroxypyruvate reductase A 0.99 EFB2_00957 Endonuclease-1 low > 86
Escherichia coli ECRC99 0.99 KEDOAH_23875 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.99 KEDOAH_08855 endA deoxyribonuclease I — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS06000 glyoxylate/hydroxypyruvate reductase GhrA 0.99 ECOLIN_RS16385 deoxyribonuclease I — —
Escherichia coli ECRC102 0.99 NIAGMN_23950 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.99 NIAGMN_17050 endA deoxyribonuclease I — —
Escherichia coli ECRC101 0.99 MCAODC_23240 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.99 MCAODC_09805 endA deoxyribonuclease I — —
Escherichia coli ECRC101 0.99 OKFHMN_03880 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.99 OKFHMN_19285 endA deoxyribonuclease I — —
Escherichia coli ECRC98 0.99 JDDGAC_07540 ghrA glyoxylate/hydroxypyruvate reductase GhrA 0.99 JDDGAC_22915 endA deoxyribonuclease I — —
Escherichia coli ECOR38 0.98 HEPCGN_23610 ghrA glyoxylate/hydroxypyruvate reductase GhrA 1.00 HEPCGN_18590 endA deoxyribonuclease I low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF3313 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.85 GFF3047 Endonuclease I precursor (EC 3.1.21.1) @ Extracellular deoxyribonuclease Dns (EC 3.1.21.-) low > 78
Enterobacter asburiae PDN3 0.78 EX28DRAFT_1896 Phosphoglycerate dehydrogenase and related dehydrogenases 0.88 EX28DRAFT_2983 Endonuclease I low > 76
Enterobacter sp. TBS_079 0.77 MPMX20_01715 Glyoxylate/hydroxypyruvate reductase A 0.88 MPMX20_03803 Endonuclease-1 low > 85
Klebsiella michiganensis M5al 0.76 BWI76_RS10890 glyoxylate/hydroxypyruvate reductase A 0.86 BWI76_RS24065 deoxyribonuclease I low > 92
Pantoea sp. MT58 0.62 IAI47_11750 glyoxylate/hydroxypyruvate reductase GhrA 0.75 IAI47_03625 deoxyribonuclease I low > 76
Serratia liquefaciens MT49 0.58 IAI46_09955 glyoxylate/hydroxypyruvate reductase GhrA 0.73 IAI46_21380 deoxyribonuclease I low > 86
Rahnella sp. WP5 0.56 EX31_RS17370 glyoxylate/hydroxypyruvate reductase GhrA 0.76 EX31_RS02655 deoxyribonuclease I low > 89
Dickeya dadantii 3937 0.34 DDA3937_RS07900 glyoxylate/hydroxypyruvate reductase A 0.79 DDA3937_RS18550 deoxyribonuclease I low > 74
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_4909 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.46 Pf1N1B4_6039 Endonuclease I precursor (EC 3.1.21.1) — —
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_28220 hydroxyacid dehydrogenase 0.46 AO353_20795 deoxyribonuclease low > 101
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS19730 glyoxylate/hydroxypyruvate reductase A 0.47 PFLU_RS20395 deoxyribonuclease low > 109
Pseudomonas fluorescens SBW25 0.32 PFLU_RS19730 glyoxylate/hydroxypyruvate reductase A 0.47 PFLU_RS20395 deoxyribonuclease low > 109
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_0147 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein 0.48 Psyr_2148 Deoxyribonuclease I low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_0147 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein 0.48 Psyr_2148 Deoxyribonuclease I low > 86
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_26720 hydroxyacid dehydrogenase 0.46 AO356_00985 deoxyribonuclease low > 104
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_372 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.46 Pf6N2E2_158 Endonuclease I precursor (EC 3.1.21.1) low > 103
Pseudomonas stutzeri RCH2 0.27 Psest_2788 Phosphoglycerate dehydrogenase and related dehydrogenases 0.47 Psest_1274 Endonuclease I low > 67
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_2327 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.47 PfGW456L13_3916 Endonuclease I precursor (EC 3.1.21.1) low > 87

Not shown: 29 genomes with orthologs for b1033 only; 11 genomes with orthologs for b2945 only