Conservation of cofitness between b0936 and b2409 in Escherichia coli BW25113

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0936 ycbO orf, hypothetical protein (VIMSS) 1.0 b2409 yfeR predicted DNA-binding transcriptional regulator (NCBI) 0.21 9
Escherichia coli ECOR27 0.99 NOLOHH_21895 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA 1.00 NOLOHH_13910 yfeR Uncharacterized HTH-type transcriptional regulator YfeR low > 75
Escherichia coli BL21 0.99 ECD_00940 aliphatic sulfonate ABC transporter periplasmic binding protein 1.00 ECD_02308 transcriptional regulator of yefH low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02730 Putative aliphatic sulfonates-binding protein 1.00 OHPLBJKB_01315 HTH-type transcriptional regulator CynR low > 73
Escherichia coli ECRC62 0.99 BNILDI_20150 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA 1.00 BNILDI_12775 yfeR Uncharacterized HTH-type transcriptional regulator YfeR low > 75
Escherichia coli ECRC98 0.98 JDDGAC_08955 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA 0.99 JDDGAC_26180 yfeR Uncharacterized HTH-type transcriptional regulator YfeR low > 86
Escherichia coli ECRC99 0.98 KEDOAH_22390 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA 0.99 KEDOAH_05990 yfeR Uncharacterized HTH-type transcriptional regulator YfeR
Escherichia coli ECRC100 0.98 OKFHMN_05345 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA 0.99 OKFHMN_22230 yfeR Uncharacterized HTH-type transcriptional regulator YfeR low > 80
Escherichia coli ECRC101 0.98 MCAODC_24735 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA 0.99 MCAODC_12760 yfeR Uncharacterized HTH-type transcriptional regulator YfeR low > 87
Escherichia fergusonii Becca 0.98 EFB2_03128 Putative aliphatic sulfonates-binding protein 1.00 EFB2_01468 HTH-type transcriptional regulator CynR low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS04955 aliphatic sulfonate ABC transporter substrate-binding protein SsuA 1.00 ECOLIN_RS13840 LysR family transcriptional regulator
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2000 ABC transporter, substrate-binding protein, aliphatic sulfonates family 0.75 EX28DRAFT_0220 Transcriptional regulator low > 76
Enterobacter sp. TBS_079 0.82 MPMX20_01594 Putative aliphatic sulfonates-binding protein 0.79 MPMX20_03302 HTH-type transcriptional regulator CynR low > 85
Serratia liquefaciens MT49 0.77 IAI46_08795 sulfonate ABC transporter substrate-binding protein 0.62 IAI46_18415 LysR family transcriptional regulator low > 86
Dickeya dadantii 3937 0.73 DDA3937_RS12865 sulfonate ABC transporter substrate-binding protein 0.42 DDA3937_RS21150 LysR family transcriptional regulator low > 74
Pantoea sp. MT58 0.73 IAI47_12725 sulfonate ABC transporter substrate-binding protein 0.57 IAI47_05470 LysR family transcriptional regulator low > 76
Dickeya dianthicola ME23 0.70 DZA65_RS13400 sulfonate ABC transporter substrate-binding protein 0.44 DZA65_RS00130 LysR family transcriptional regulator low > 75
Dickeya dianthicola 67-19 0.70 HGI48_RS12935 sulfonate ABC transporter substrate-binding protein 0.43 HGI48_RS00115 LysR family transcriptional regulator low > 71
Rahnella sp. WP5 0.70 EX31_RS18105 sulfonate ABC transporter substrate-binding protein 0.63 EX31_RS20145 LysR family transcriptional regulator low > 89
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS11505 sulfonate ABC transporter substrate-binding protein 0.37 ABZR87_RS00750 LysR family transcriptional regulator low > 80
Ralstonia solanacearum PSI07 0.47 RPSI07_RS17435 aliphatic sulfonate ABC transporter substrate-binding protein 0.42 RPSI07_RS12195 LysR family transcriptional regulator low > 81
Ralstonia solanacearum GMI1000 0.46 RS_RS06710 aliphatic sulfonate ABC transporter substrate-binding protein 0.41 RS_RS12720 LysR family transcriptional regulator low > 80
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS00050 aliphatic sulfonate ABC transporter substrate-binding protein 0.41 RALBFv3_RS05100 LysR family transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.46 UW163_RS13380 aliphatic sulfonate ABC transporter substrate-binding protein 0.41 UW163_RS08525 LysR family transcriptional regulator
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS16490 sulfonate ABC transporter substrate-binding protein 0.45 QEN71_RS23130 LysR family transcriptional regulator low > 153
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS34705 ABC transporter substrate-binding protein 0.45 BPHYT_RS08035 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_919 Alkanesulfonates-binding protein 0.16 PfGW456L13_3348 Transcriptional regulator low > 87
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF5029 Alkanesulfonates-binding protein 0.46 GFF17 LysR family transcriptional regulator YfeR low > 90
Paraburkholderia graminis OAS925 0.38 ABIE53_001849 sulfonate transport system substrate-binding protein 0.42 ABIE53_001823 DNA-binding transcriptional LysR family regulator low > 113
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS32605 sulfonate ABC transporter substrate-binding protein 0.46 RR42_RS03425 LysR family transcriptional regulator low > 128
Variovorax sp. SCN45 0.36 GFF1253 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) 0.50 GFF6064 Transcriptional regulator YfeR, LysR family
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_02762 sulfonate transport system substrate-binding protein 0.42 H281DRAFT_05098 DNA-binding transcriptional regulator, LysR family
Variovorax sp. OAS795 0.35 ABID97_RS15500 aliphatic sulfonate ABC transporter substrate-binding protein 0.23 ABID97_RS27955 LysR family transcriptional regulator low > 91
Klebsiella michiganensis M5al 0.32 BWI76_RS22885 aliphatic sulfonate ABC transporter substrate-binding protein 0.79 BWI76_RS20610 LysR family transcriptional regulator low > 92

Not shown: 24 genomes with orthologs for b0936 only; 5 genomes with orthologs for b2409 only