Conservation of cofitness between b3355 and b2103 in Escherichia coli BW25113

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3355 prkB predicted phosphoribulokinase (NCBI) 1.0 b2103 thiD phosphomethylpyrimidine kinase (NCBI) 0.37 7
Escherichia coli ECOR38 1.00 HEPCGN_16075 prkB phosphoribulokinase 0.99 HEPCGN_02760 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 85
Escherichia fergusonii Becca 1.00 EFB2_00467 Phosphoribulokinase, plasmid 1.00 EFB2_01754 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 86
Escherichia coli BL21 1.00 ECD_03206 putative phosphoribulokinase 1.00 ECD_02031 hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00347 Phosphoribulokinase, plasmid 1.00 OHPLBJKB_01607 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 73
Escherichia coli ECRC62 1.00 BNILDI_02470 prkB phosphoribulokinase 1.00 BNILDI_14330 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli ECRC99 1.00 KEDOAH_10890 prkB phosphoribulokinase 1.00 KEDOAH_04075 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS19215 phosphoribulokinase 0.99 ECOLIN_RS12335 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli ECRC101 1.00 OKFHMN_17250 prkB phosphoribulokinase 1.00 OKFHMN_24075 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli ECRC98 1.00 JDDGAC_20880 prkB phosphoribulokinase 1.00 JDDGAC_28185 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli ECRC101 1.00 MCAODC_07780 prkB phosphoribulokinase 1.00 MCAODC_21085 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli ECRC102 1.00 NIAGMN_15020 prkB phosphoribulokinase 1.00 NIAGMN_22020 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Escherichia coli ECOR27 1.00 NOLOHH_09050 prkB phosphoribulokinase 1.00 NOLOHH_15415 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 57
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.98 GFF3714 Phosphoribulokinase (EC 2.7.1.19) homolog, function unknown 0.91 GFF3834 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) low > 78
Klebsiella michiganensis M5al 0.96 BWI76_RS25975 phosphoribulokinase 0.92 BWI76_RS19375 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 92
Enterobacter asburiae PDN3 0.94 EX28DRAFT_4174 Phosphoribulokinase 0.90 EX28DRAFT_0469 hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 76
Enterobacter sp. TBS_079 0.94 MPMX20_04258 Phosphoribulokinase, plasmid 0.90 MPMX20_03076 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 85
Pantoea sp. MT58 0.91 IAI47_01975 phosphoribulokinase 0.76 IAI47_06810 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 76
Erwinia tracheiphila SCR3 0.90 LU632_RS22790 phosphoribulokinase 0.76 LU632_RS08590 thiD bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 74
Serratia liquefaciens MT49 0.90 IAI46_23570 phosphoribulokinase 0.78 IAI46_19100 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 86
Pectobacterium carotovorum WPP14 0.89 HER17_RS01925 phosphoribulokinase 0.78 HER17_RS06265 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 75
Rahnella sp. WP5 0.88 EX31_RS04610 phosphoribulokinase 0.79 EX31_RS20390 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 89
Dickeya dianthicola 67-19 0.88 HGI48_RS19555 phosphoribulokinase 0.75 HGI48_RS15410 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 71
Dickeya dadantii 3937 0.87 DDA3937_RS19435 phosphoribulokinase 0.76 DDA3937_RS15335 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 74
Dickeya dianthicola ME23 0.87 DZA65_RS20640 phosphoribulokinase 0.74 DZA65_RS16235 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.40 52
Vibrio cholerae E7946 ATCC 55056 0.75 CSW01_13225 phosphoribulokinase 0.40 CSW01_06545 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF2199 Phosphoribulokinase (EC 2.7.1.19) 0.39 GFF249 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) low > 90
Variovorax sp. OAS795 0.61 ABID97_RS12880 phosphoribulokinase 0.34 ABID97_RS15330 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS32780 phosphoribulokinase 0.54 QEN71_RS06305 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Rhodospirillum rubrum S1H 0.59 Rru_A2404 Phosphoribulokinase (NCBI) 0.38 Rru_A1102 Phosphomethylpyrimidine kinase (NCBI) — —
Rhodopseudomonas palustris CGA009 0.57 TX73_024115 phosphoribulokinase 0.49 TX73_020570 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Dechlorosoma suillum PS 0.56 Dsui_1562 phosphoribulokinase 0.26 Dsui_0662 phosphomethylpyrimidine kinase — —
Azospirillum sp. SherDot2 0.56 MPMX19_02943 Phosphoribulokinase, chromosomal 0.36 MPMX19_06182 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase — —
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_01313 phosphoribulokinase 0.54 H281DRAFT_00587 hydroxymethylpyrimidine kinase /phosphomethylpyrimidine kinase — —
Magnetospirillum magneticum AMB-1 0.56 AMB_RS13555 phosphoribulokinase 0.31 AMB_RS16155 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Paraburkholderia graminis OAS925 0.55 ABIE53_005500 phosphoribulokinase 0.51 ABIE53_002529 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase — —
Sinorhizobium meliloti 1021 0.53 SM_b20201 phosphoribulokinase 0.44 SM_b20962 phoshomethylpyrimidine kinase low > 103

Not shown: 6 genomes with orthologs for b3355 only; 53 genomes with orthologs for b2103 only