Conservation of cofitness between b3487 and b0616 in Escherichia coli BW25113

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3487 yhiI predicted HlyD family secretion protein (NCBI) 1.0 b0616 citE citrate lyase beta chain (acyl lyase subunit) (VIMSS) 0.18 4
Escherichia coli BL21 1.00 ECD_03337 putative membrane fusion protein (MFP) of efflux pump 1.00 ECD_00584 citrate lyase, citryl-ACP lyase (beta) subunit low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00214 hypothetical protein 1.00 OHPLBJKB_03089 Citrate lyase subunit beta low > 73
Escherichia coli ECRC101 0.99 MCAODC_06985 yhiI Uncharacterized protein YhiI 1.00 MCAODC_26670 citE citrate (pro-3S)-lyase subunit beta low > 87
Escherichia coli ECRC98 0.99 JDDGAC_20095 yhiI Uncharacterized protein YhiI 1.00 JDDGAC_11100 citE citrate (pro-3S)-lyase subunit beta low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS19945 HlyD family secretion protein 1.00 ECOLIN_RS03365 citrate (pro-3S)-lyase subunit beta
Escherichia coli ECRC99 0.99 KEDOAH_11675 yhiI Uncharacterized protein YhiI 1.00 KEDOAH_20515 citE citrate (pro-3S)-lyase subunit beta
Escherichia coli ECRC102 0.99 NIAGMN_14235 yhiI Uncharacterized protein YhiI 1.00 NIAGMN_05510 citE citrate lyase subunit beta
Escherichia coli ECRC100 0.99 OKFHMN_16465 yhiI Uncharacterized protein YhiI 1.00 OKFHMN_07455 citE citrate (pro-3S)-lyase subunit beta low > 80
Escherichia fergusonii Becca 0.99 EFB2_00325 hypothetical protein 1.00 EFB2_03475 Citrate lyase subunit beta low > 86
Escherichia coli ECRC62 0.99 BNILDI_03155 yhiI Uncharacterized protein YhiI 1.00 BNILDI_21840 citE citrate (pro-3S)-lyase subunit beta low > 75
Escherichia coli ECOR38 0.99 HEPCGN_15385 yhiI Uncharacterized protein YhiI 1.00 HEPCGN_00820 citE citrate (pro-3S)-lyase subunit beta low > 87
Escherichia coli ECOR27 0.99 NOLOHH_08400 yhiI Uncharacterized protein YhiI 1.00 NOLOHH_23830 citE citrate lyase subunit beta low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF525 Putative membrane protein 0.93 GFF4528 Citrate lyase beta chain (EC 4.1.3.6) low > 78
Klebsiella michiganensis M5al 0.72 BWI76_RS03515 hypothetical protein 0.61 BWI76_RS04445 citrate (pro-3S)-lyase subunit beta low > 92
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS09130 hemolysin D 0.16 HSERO_RS14045 aldolase low > 78
Pseudomonas stutzeri RCH2 0.52 Psest_4259 Multidrug resistance efflux pump 0.17 Psest_2665 Citrate lyase beta subunit
Agrobacterium fabrum C58 0.50 Atu4666 HlyD family secretion protein 0.20 Atu2788 citrate lyase, beta subunit low > 89
Azospirillum brasilense Sp245 0.46 AZOBR_RS27955 glycoside hydrolase family 43 0.28 AZOBR_RS14115 (3S)-malyl-CoA thiolesterase low > 97
Rhodopseudomonas palustris CGA009 0.46 TX73_021175 HlyD family efflux transporter periplasmic adaptor subunit 0.26 TX73_001205 CoA ester lyase low > 86
Castellaniella sp019104865 MT123 0.45 ABCV34_RS01855 HlyD family efflux transporter periplasmic adaptor subunit 0.19 ABCV34_RS09445 CoA ester lyase low > 48
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_4473 HlyD family secretion protein 0.23 Pf6N2E2_1831 Citrate lyase beta chain (EC 4.1.3.6) low > 103
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_12980 hemolysin secretion protein D 0.13 AO356_28780 host specificity protein
Pseudomonas simiae WCS417 0.33 PS417_27320 hemolysin secretion protein D 0.15 PS417_14915 host specificity protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS28975 HlyD family efflux transporter periplasmic adaptor subunit 0.14 PFLU_RS16935 CoA ester lyase low > 109
Pseudomonas fluorescens SBW25 0.32 PFLU_RS28975 HlyD family efflux transporter periplasmic adaptor subunit 0.14 PFLU_RS16935 CoA ester lyase low > 109
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS09740 hemolysin secretion protein D 0.27 RR42_RS24350 malyl-CoA thiolesterase low > 128
Rhodospirillum rubrum S1H 0.21 Rru_A0096 Secretion protein HlyD (NCBI) 0.27 Rru_A1200 Citrate lyase (NCBI) low > 58
Phocaeicola dorei CL03T12C01 0.12 ABI39_RS17365 HlyD family efflux transporter periplasmic adaptor subunit 0.22 ABI39_RS11090 CoA ester lyase low > 72

Not shown: 16 genomes with orthologs for b3487 only; 34 genomes with orthologs for b0616 only