Conservation of cofitness between b0651 and b0195 in Escherichia coli BW25113

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0651 rihA ribonucleoside hydrolase 1 (NCBI) 1.0 b0195 yaeB hypothetical protein (NCBI) 0.17 4
Escherichia coli BL21 1.00 ECD_00617 ribonucleoside hydrolase 1 1.00 ECD_00194 tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase, SAM-dependent low > 60
Escherichia coli ECRC101 1.00 MCAODC_26490 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 MCAODC_00585 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO — —
Escherichia coli ECRC101 1.00 OKFHMN_07275 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 OKFHMN_10070 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO — —
Escherichia coli ECRC102 1.00 NIAGMN_05330 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 NIAGMN_07920 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO — —
Escherichia coli ECRC98 1.00 JDDGAC_10920 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 JDDGAC_13665 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO — —
Escherichia coli ECRC99 1.00 KEDOAH_20695 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 KEDOAH_18085 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO — —
Escherichia coli ECRC62 0.99 BNILDI_21670 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 BNILDI_09255 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO — —
Escherichia coli ECOR27 0.99 NOLOHH_23660 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 NOLOHH_02415 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03062 Pyrimidine-specific ribonucleoside hydrolase RihA 1.00 OHPLBJKB_03466 tRNA (adenine(37)-N6)-methyltransferase low > 73
Escherichia coli ECOR38 0.99 HEPCGN_00955 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 HEPCGN_08010 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS03505 pyrimidine-specific ribonucleoside hydrolase RihA 0.99 ECOLIN_RS01075 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 52
Escherichia fergusonii Becca 0.99 EFB2_03448 Pyrimidine-specific ribonucleoside hydrolase RihA 0.99 EFB2_03848 tRNA (adenine(37)-N6)-methyltransferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF4569 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.90 GFF25 COG1720: Uncharacterized conserved protein low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS13490 pyrimidine-specific ribonucleoside hydrolase RihA 0.86 BWI76_RS05345 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 92
Enterobacter sp. TBS_079 0.89 MPMX20_01302 Pyrimidine-specific ribonucleoside hydrolase RihA 0.85 MPMX20_00879 tRNA (adenine(37)-N6)-methyltransferase low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2320 Inosine-uridine nucleoside N-ribohydrolase 0.85 EX28DRAFT_3783 tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA low > 76
Shewanella loihica PV-4 0.74 Shew_0697 rihA ribonucleoside hydrolase 1 (RefSeq) 0.50 Shew_2589 hypothetical protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.73 Shewana3_3476 rihA ribonucleoside hydrolase 1 (RefSeq) 0.47 Shewana3_1400 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.73 SO0811 inosine-uridine preferring nucleoside hydrolase family protein (NCBI ptt file) 0.48 SO3151 conserved hypothetical protein (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.62 IAI46_05975 pyrimidine-specific ribonucleoside hydrolase RihA 0.74 IAI46_20095 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 86
Rahnella sp. WP5 0.40 EX31_RS20270 nucleoside hydrolase 0.71 EX31_RS12900 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 89
Pectobacterium carotovorum WPP14 0.37 HER17_RS00105 nucleoside hydrolase 0.71 HER17_RS04360 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 75
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_20845 uridine/adenosine nucleosidase (EC 3.2.2.3; EC 3.2.2.7) (from data) 0.41 AO353_16855 tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA low > 101
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_167 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.37 Pf6N2E2_2982 COG1720: Uncharacterized conserved protein low > 103
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_6029 uridine nucleosidase (EC 3.2.2.3) (from data) 0.40 Pf1N1B4_3155 COG1720: Uncharacterized conserved protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_00940 uridine/adenosine nucleosidase (EC 3.2.2.3; EC 3.2.2.7) (from data) 0.40 AO356_05620 tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA low > 104
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS20350 nucleoside hydrolase 0.39 PFLU_RS05930 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 109
Pseudomonas simiae WCS417 0.33 PS417_18375 hypothetical protein 0.38 PS417_05860 hypothetical protein low > 88
Pseudomonas fluorescens SBW25 0.33 PFLU_RS20350 nucleoside hydrolase 0.39 PFLU_RS05930 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO low > 109
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_3906 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.39 PfGW456L13_4658 COG1720: Uncharacterized conserved protein low > 87
Pseudomonas putida KT2440 0.33 PP_2460 ribonucleoside hydrolase 0.39 PP_1189 conserved hypothetical protein 0.26 9

Not shown: 16 genomes with orthologs for b0651 only; 15 genomes with orthologs for b0195 only