Conservation of cofitness between Rru_A1158 and Rru_A2556 in Rhodospirillum rubrum S1H

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A1158 Osmosensitive K+ channel Signal Transduction Histidine Kinase (NCBI) 1.0 Rru_A2556 Mandelate racemase/muconate lactonizing enzyme (NCBI) 0.60 5
Azospirillum brasilense Sp245 0.49 AZOBR_RS23975 histidine kinase 0.44 AZOBR_RS05375 mandelate racemase low > 97
Agrobacterium fabrum C58 0.47 Atu3787 two component sensor kinase 0.45 Atu1648 mandelate racemase/muconate lactonizing enzyme family protein low > 89
Azospirillum sp. SherDot2 0.47 MPMX19_03748 Sensor protein KdpD 0.43 MPMX19_00570 L-Ala-D/L-Glu epimerase low > 112
Rhizobium sp. OAE497 0.46 ABIE40_RS24610 sensor histidine kinase KdpD 0.46 ABIE40_RS10435 N-acetyl-D-Glu racemase DgcA low > 107
Rhodopseudomonas palustris CGA009 0.46 TX73_015550 sensor histidine kinase KdpD 0.46 TX73_020535 dipeptide epimerase low > 86
Pseudomonas putida KT2440 0.38 PP_4158 sensor protein 0.12 PP_3715 Muconate cycloisomerase 1 low > 96
Caulobacter crescentus NA1000 0.37 CCNA_01666 osmosensitive K+ channel histidine kinase kdpD 0.38 CCNA_03211 L-Ala-D/L-Glu racemase 0.69 24
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_01666 osmosensitive K+ channel histidine kinase kdpD 0.38 CCNA_03211 L-Ala-D/L-Glu racemase low > 67
Sinorhizobium meliloti 1021 0.36 SMa2327 sensor protein 0.49 SMc00459 hypothetical protein low > 103
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS24345 DUF4118 domain-containing protein 0.09 QEN71_RS15720 muconate/chloromuconate family cycloisomerase low > 153
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS06460 histidine kinase 0.12 BPHYT_RS07840 muconate cycloisomerase low > 109
Serratia liquefaciens MT49 0.34 IAI46_06165 two-component system sensor histidine kinase KdbD 0.41 IAI46_13460 L-Ala-D/L-Glu epimerase 0.60 2
Enterobacter sp. TBS_079 0.34 MPMX20_01338 Sensor protein KdpD 0.38 MPMX20_02451 L-Ala-D/L-Glu epimerase low > 85
Rahnella sp. WP5 0.34 EX31_RS23335 two-component system sensor histidine kinase KdbD 0.40 EX31_RS06345 L-Ala-D/L-Glu epimerase low > 89
Enterobacter asburiae PDN3 0.34 EX28DRAFT_2283 Osmosensitive K+ channel histidine kinase 0.36 EX28DRAFT_0997 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily low > 76
Klebsiella michiganensis M5al 0.34 BWI76_RS08305 two-component sensor histidine kinase 0.41 BWI76_RS12500 dipeptide epimerase low > 92
Escherichia coli Nissle 1917 0.33 ECOLIN_RS03755 two-component system sensor histidine kinase KdpD 0.37 ECOLIN_RS07955 L-Ala-D/L-Glu epimerase — —
Escherichia coli ECOR27 0.33 NOLOHH_23455 kdpD two-component system sensor histidine kinase KdpD 0.38 NOLOHH_19990 ycjG L-Ala-D/L-Glu epimerase low > 75
Escherichia coli ECRC101 0.33 MCAODC_26290 kdpD two-component system sensor histidine kinase KdpD 0.38 MCAODC_15975 ycjG L-Ala-D/L-Glu epimerase low > 87
Escherichia coli ECRC102 0.33 NIAGMN_05130 kdpD two-component system sensor histidine kinase KdpD 0.38 NIAGMN_26465 ycjG L-Ala-D/L-Glu epimerase — —
Escherichia coli ECRC99 0.33 KEDOAH_20895 kdpD two-component system sensor histidine kinase KdpD 0.38 KEDOAH_26480 ycjG L-Ala-D/L-Glu epimerase — —
Escherichia coli ECRC98 0.33 JDDGAC_10725 kdpD two-component system sensor histidine kinase KdpD 0.38 JDDGAC_04840 ycjG L-Ala-D/L-Glu epimerase low > 86
Escherichia coli ECRC100 0.33 OKFHMN_07075 kdpD two-component system sensor histidine kinase KdpD 0.38 OKFHMN_02295 ycjG L-Ala-D/L-Glu epimerase low > 80
Escherichia fergusonii Becca 0.33 EFB2_03401 Sensor protein KdpD 0.38 EFB2_02602 L-Ala-D/L-Glu epimerase 0.30 63
Escherichia coli BW25113 0.33 b0695 kdpD fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein (NCBI) 0.38 b1325 ycjG putative muconate cycloisomerase I (EC 5.5.-.-) (VIMSS) low > 76
Escherichia coli BL21 0.33 ECD_00652 fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein 0.38 ECD_01302 L-Ala-D/L-Glu epimerase low > 61
Escherichia coli ECOR38 0.33 HEPCGN_01160 kdpD two-component system sensor histidine kinase KdpD 0.40 HEPCGN_25895 ycjG L-Ala-D/L-Glu epimerase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_03022 Sensor protein KdpD 0.38 OHPLBJKB_02357 L-Ala-D/L-Glu epimerase 0.31 59
Escherichia coli ECRC62 0.33 BNILDI_21460 kdpD two-component system sensor histidine kinase KdpD 0.38 BNILDI_18140 ycjG L-Ala-D/L-Glu epimerase low > 75
Pectobacterium carotovorum WPP14 0.33 HER17_RS15045 two-component system sensor histidine kinase KdpD 0.46 HER17_RS06650 L-Ala-D/L-Glu epimerase low > 75
Dickeya dianthicola 67-19 0.33 HGI48_RS06415 two-component system sensor histidine kinase KdpD 0.36 HGI48_RS00655 L-Ala-D/L-Glu epimerase low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF4607 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.37 GFF2677 L-alanine-DL-glutamate epimerase low > 78
Dickeya dianthicola ME23 0.32 DZA65_RS06760 two-component system sensor histidine kinase KdbD 0.36 DZA65_RS00710 L-Ala-D/L-Glu epimerase low > 75
Dickeya dadantii 3937 0.32 DDA3937_RS06370 two-component system sensor histidine kinase KdpD 0.45 DDA3937_RS07105 dipeptide epimerase low > 74
Pantoea sp. MT58 0.32 IAI47_01250 two-component system sensor histidine kinase KdbD 0.37 IAI47_11350 L-Ala-D/L-Glu epimerase low > 76
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_3881 Osmosensitive K+ channel histidine kinase 0.33 Ga0059261_1652 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily low > 68

Not shown: 34 genomes with orthologs for Rru_A1158 only; 12 genomes with orthologs for Rru_A2556 only