Homologs of ABIE40_RS03580 from Rhizobium sp. OAE497

L,D-transpeptidase
SEED: ErfK/YbiS/YcfS/YnhG

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhizobium sp. OAE497 ABIE40_RS03580 L,D-transpeptidase insig. 100 100
o Sinorhizobium meliloti 1021 SMc00925 signal peptide protein insig. 68 87
  Agrobacterium fabrum C58 Atu0669 hypothetical protein insig. 59 78
  Sinorhizobium meliloti 1021 SMc00924 hypothetical protein insig. 62 70
  Sinorhizobium meliloti 1021 SMc04338 hypothetical protein insig. 61 71
  Rhodopseudomonas palustris CGA009 TX73_024925 L,D-transpeptidase insig. 59 79
  Rhizobium sp. OAE497 ABIE40_RS03585 L,D-transpeptidase insig. 62 69
o Bosea sp. OAE506 ABIE41_RS14200 L,D-transpeptidase insig. 50 87
  Bosea sp. OAE506 ABIE41_RS22050 L,D-transpeptidase sig. 56 73
  Rhodopseudomonas palustris CGA009 TX73_018480 L,D-transpeptidase insig. 61 74
  Rhizobium sp. OAE497 ABIE40_RS05790 L,D-transpeptidase insig. 57 71
  Bosea sp. OAE506 ABIE41_RS22060 L,D-transpeptidase insig. 57 71
  Agrobacterium fabrum C58 Atu2336 hypothetical protein insig. 53 72
  Rhodopseudomonas palustris CGA009 TX73_023050 L,D-transpeptidase sig. 51 77
  Sinorhizobium meliloti 1021 SMc02636 hypothetical protein strong 53 77
  Bosea sp. OAE506 ABIE41_RS10175 L,D-transpeptidase insig. 49 88
  Rhodopseudomonas palustris CGA009 TX73_005880 L,D-transpeptidase insig. 52 80
  Rhodopseudomonas palustris CGA009 TX73_018715 L,D-transpeptidase family protein no data 53 77
  Sinorhizobium meliloti 1021 SMc01200 hypothetical protein sig. 46 83
  Rhizobium sp. OAE497 ABIE40_RS13175 L,D-transpeptidase insig. 50 75
  Rhodopseudomonas palustris CGA009 TX73_021875 L,D-transpeptidase insig. 55 69
  Bosea sp. OAE506 ABIE41_RS13445 L,D-transpeptidase insig. 51 70
  Bosea sp. OAE506 ABIE41_RS21100 L,D-transpeptidase insig. 52 67
  Dinoroseobacter shibae DFL-12 Dshi_3406 ErfK/YbiS/YcfS/YnhG family protein (RefSeq) insig. 49 76
  Phaeobacter inhibens DSM 17395 PGA1_c26350 Uncharacterized protein conserved in bacteria insig. 53 66
  Agrobacterium fabrum C58 Atu0048 hypothetical protein strong 49 71
  Agrobacterium fabrum C58 Atu0844 hypothetical protein insig. 47 70
  Rhizobium sp. OAE497 ABIE40_RS19495 L,D-transpeptidase strong 48 71
  Sinorhizobium meliloti 1021 SMc00039 hypothetical protein insig. 49 71
  Rhodopseudomonas palustris CGA009 TX73_008305 L,D-transpeptidase insig. 45 83
  Agrobacterium fabrum C58 Atu3331 hypothetical protein insig. 44 79
  Rhizobium sp. OAE497 ABIE40_RS04655 L,D-transpeptidase insig. 45 71
  Agrobacterium fabrum C58 Atu0845 hypothetical protein sig. 49 68
  Sinorhizobium meliloti 1021 SMc02582 hypothetical protein strong 47 74
  Rhizobium sp. OAE497 ABIE40_RS04660 L,D-transpeptidase insig. 45 70
  Agrobacterium fabrum C58 Atu5196 hypothetical protein insig. 44 70
  Sinorhizobium meliloti 1021 SM_b21516 hypothetical protein strong 45 70
  Dinoroseobacter shibae DFL-12 Dshi_3595 ErfK/YbiS/YcfS/YnhG family protein (RefSeq) no data 49 63
  Dinoroseobacter shibae DFL-12 Dshi_3933 ErfK/YbiS/YcfS/YnhG family protein (RefSeq) no data 49 63
  Rhodopseudomonas palustris CGA009 TX73_001100 L,D-transpeptidase cofit 48 64
  Dinoroseobacter shibae DFL-12 Dshi_3598 ErfK/YbiS/YcfS/YnhG family protein (RefSeq) no data 42 62
  Dinoroseobacter shibae DFL-12 Dshi_3936 ErfK/YbiS/YcfS/YnhG family protein (RefSeq) no data 42 62
  Dinoroseobacter shibae DFL-12 Dshi_3607 ErfK/YbiS/YcfS/YnhG family protein (RefSeq) no data 37 70
  Dinoroseobacter shibae DFL-12 Dshi_3945 ErfK/YbiS/YcfS/YnhG family protein (RefSeq) no data 37 70
  Bosea sp. OAE506 ABIE41_RS08190 L,D-transpeptidase insig. 45 62
  Klebsiella michiganensis M5al BWI76_RS09030 transpeptidase strong 44 61
  Escherichia coli BL21 ECD_01899 L,D-transpeptidase linking Lpp to murein sig. 42 62
  Escherichia coli ECOR27 NOLOHH_16050 ldtA L,D-transpeptidase cofit 42 62
  Escherichia coli ECRC100 OKFHMN_25140 ldtA L,D-transpeptidase insig. 42 62
  Escherichia coli ECRC101 MCAODC_20250 ldtA L,D-transpeptidase insig. 42 62
  Escherichia coli ECRC102 NIAGMN_22645 ldtA L,D-transpeptidase insig. 42 62
  Escherichia coli ECRC62 BNILDI_14880 ldtA L,D-transpeptidase cofit 42 62
  Escherichia coli ECRC98 JDDGAC_29270 ldtA L,D-transpeptidase cofit 42 62
  Escherichia coli ECRC99 KEDOAH_02970 ldtA L,D-transpeptidase no data 42 62
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01718 putative L,D-transpeptidase ErfK/SrfK insig. 42 62
  Escherichia coli BW25113 b1990 erfK conserved protein with NAD(P)-binding Rossmann-fold domain (NCBI) insig. 42 62
  Escherichia fergusonii Becca EFB2_01899 putative L,D-transpeptidase ErfK/SrfK insig. 41 62
  Escherichia coli ECOR38 HEPCGN_03475 ldtA L,D-transpeptidase insig. 41 62
  Escherichia coli Nissle 1917 ECOLIN_RS11615 L,D-transpeptidase insig. 41 62
  Rhizobium sp. OAE497 ABIE40_RS26600 L,D-transpeptidase insig. 51 51
  Enterobacter sp. TBS_079 MPMX20_02985 putative L,D-transpeptidase ErfK/SrfK insig. 43 61
  Escherichia coli BL21 ECD_00786 L,D-transpeptidase linking Lpp to murein strong 42 61
  Escherichia fergusonii Becca EFB2_03286 putative L,D-transpeptidase YbiS cofit 42 61
  Escherichia coli ECOR27 NOLOHH_22515 ldtB L,D-transpeptidase cofit 42 61
  Escherichia coli ECOR38 HEPCGN_01875 ldtB L,D-transpeptidase strong 42 61
  Escherichia coli ECRC100 OKFHMN_06165 ldtB L,D-transpeptidase cofit 42 61
  Escherichia coli ECRC101 MCAODC_25380 ldtB L,D-transpeptidase cofit 42 61
  Escherichia coli ECRC102 NIAGMN_04210 ldtB L,D-transpeptidase insig. 42 61
  Escherichia coli ECRC62 BNILDI_20795 ldtB L,D-transpeptidase strong 42 61
  Escherichia coli ECRC98 JDDGAC_09800 ldtB L,D-transpeptidase strong 42 61
  Escherichia coli ECRC99 KEDOAH_21745 ldtB L,D-transpeptidase no data 42 61
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02894 putative L,D-transpeptidase YbiS cofit 42 61
  Escherichia coli Nissle 1917 ECOLIN_RS04365 L,D-transpeptidase no data 42 61
  Enterobacter asburiae PDN3 EX28DRAFT_2148 Uncharacterized protein conserved in bacteria strong 42 61
  Escherichia coli BW25113 b0819 ybiS hypothetical protein (NCBI) strong 42 61
  Pseudomonas sp. S08-1 OH686_01780 L,D-transpeptidase strong 40 65
  Serratia liquefaciens MT49 IAI46_02600 L,D-transpeptidase family protein insig. 40 64
  Enterobacter sp. TBS_079 MPMX20_01456 putative L,D-transpeptidase YbiS sig. 42 61
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF716 L,D-transpeptidase YbiS cofit 42 61
  Enterobacter asburiae PDN3 EX28DRAFT_0563 Uncharacterized protein conserved in bacteria insig. 42 70
  Pseudomonas syringae pv. syringae B728a Psyr_2070 ErfK/YbiS/YcfS/YnhG strong 42 65
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2070 ErfK/YbiS/YcfS/YnhG insig. 42 65
  Dickeya dianthicola 67-19 HGI48_RS03670 L,D-transpeptidase family protein strong 38 64
  Dickeya dianthicola ME23 DZA65_RS03790 L,D-transpeptidase family protein insig. 38 64
  Pantoea sp. MT58 IAI47_10850 L,D-transpeptidase family protein sig. 36 66
  Dickeya dadantii 3937 DDA3937_RS03570 L,D-transpeptidase family protein sig. 38 64
  Klebsiella michiganensis M5al BWI76_RS18620 L,D-transpeptidase insig. 44 57
  Shewanella sp. ANA-3 Shewana3_0844 ErfK/YbiS/YcfS/YnhG family protein (RefSeq) strong 39 66
  Pantoea sp. MT58 IAI47_13415 L,D-transpeptidase family protein strong 39 65
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3970 L,D-transpeptidase YbiS insig. 40 62
  Pseudomonas putida KT2440 PP_2320 conserved exported protein of unknown function strong 33 76
  Pseudomonas sp. RS175 PFR28_00960 hypothetical protein strong 39 65
  Serratia liquefaciens MT49 IAI46_11175 L,D-transpeptidase family protein cofit 40 58
  Enterobacter asburiae PDN3 EX28DRAFT_1681 Uncharacterized protein conserved in bacteria insig. 39 58
  Klebsiella michiganensis M5al BWI76_RS16970 murein L,D-transpeptidase sig. 37 62
  Erwinia tracheiphila SCR3 LU632_RS09245 L,D-transpeptidase family protein strong 39 64
  Shewanella oneidensis MR-1 SO3748 LysM domain protein (NCBI ptt file) strong 37 66
  Escherichia coli BL21 ECD_01109 L,D-transpeptidase linking Lpp to murein insig. 39 62
  Escherichia fergusonii Becca EFB2_02862 putative L,D-transpeptidase YcfS insig. 39 62
  Escherichia coli Nissle 1917 ECOLIN_RS06420 L,D-transpeptidase LdtC insig. 39 62