Conservation of cofitness between Xcc-8004.1566.1 and Xcc-8004.5290.1 in Xanthomonas campestris pv. campestris strain 8004

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.1566.1 Putative activity regulator of membrane protease YbbK 1.0 Xcc-8004.5290.1 Tetracycline-efflux transporter 0.30 16
Lysobacter sp. OAE881 0.60 ABIE51_RS16375 NfeD family protein 0.70 ABIE51_RS01325 TCR/Tet family MFS transporter low > 62
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS10540 NfeD family protein 0.52 ABZR86_RS16860 TCR/Tet family MFS transporter low > 74
Agrobacterium fabrum C58 0.39 Atu3773 hypothetical protein 0.25 Atu4206 tetracycline resistance protein low > 89
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_11260 ybbJ Membrane protein implicated in regulation of membrane protease activity 0.54 OKGIIK_12840 Tetracycline resistance MFS efflux pump low > 52
Rhodanobacter denitrificans MT42 0.38 LRK55_RS04150 NfeD family protein 0.51 LRK55_RS10740 tetracycline resistance MFS efflux pump low > 63
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS04375 NfeD family protein 0.51 LRK54_RS11035 tetracycline resistance MFS efflux pump low > 59
Sinorhizobium meliloti 1021 0.38 SMc04021 hypothetical protein 0.34 SMc01212 transport transmembrane protein — —
Rhizobium sp. OAE497 0.35 ABIE40_RS16235 NfeD family protein 0.33 ABIE40_RS12785 TCR/Tet family MFS transporter low > 107
Rhodopseudomonas palustris CGA009 0.33 TX73_004520 NfeD family protein 0.48 TX73_016005 tetracycline resistance MFS efflux pump low > 86
Dickeya dianthicola ME23 0.33 DZA65_RS06235 NfeD family protein 0.11 DZA65_RS04515 multidrug efflux MFS transporter low > 75
Dickeya dadantii 3937 0.33 DDA3937_RS05855 NfeD family protein 0.11 DDA3937_RS04635 multidrug efflux MFS transporter low > 74
Dickeya dianthicola 67-19 0.33 HGI48_RS05900 NfeD family protein 0.11 HGI48_RS04590 multidrug efflux MFS transporter low > 71
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_0898 Membrane protein implicated in regulation of membrane protease activity 0.28 Ga0059261_0862 Arabinose efflux permease low > 68
Pectobacterium carotovorum WPP14 0.29 HER17_RS15615 NfeD family protein 0.12 HER17_RS16995 multidrug efflux MFS transporter low > 75
Klebsiella michiganensis M5al 0.29 BWI76_RS06915 membrane protein 0.12 BWI76_RS06135 MFS transporter low > 92
Escherichia coli ECRC62 0.28 BNILDI_22415 ybbJ Inner membrane protein YbbJ 0.22 BNILDI_09400 tet(B tetracycline efflux MFS transporter Tet(B) low > 75
Escherichia coli BW25113 0.28 b0488 ybbJ conserved inner membrane protein (RefSeq) 0.10 b1053 mdtG predicted drug efflux system (NCBI) low > 76
Escherichia coli ECOR38 0.28 HEPCGN_06640 ybbJ Inner membrane protein YbbJ 0.22 HEPCGN_10845 tet(B tetracycline efflux MFS transporter Tet(B) low > 87
Escherichia coli ECOR27 0.28 NOLOHH_00995 ybbJ Inner membrane protein YbbJ 0.10 NOLOHH_21305 mdtG multidrug efflux MFS transporter MdtG low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_03186 Inner membrane protein YbbJ 0.10 OHPLBJKB_02612 Multidrug resistance protein MdtG low > 73
Escherichia coli BL21 0.28 ECD_00439 inner membrane protein; stimulator of the QmcA suppressor of ftsH-htpX 0.10 ECD_01049 putative drug efflux system protein low > 61
Azospirillum sp. SherDot2 0.28 MPMX19_00926 Inner membrane protein YbbJ 0.41 MPMX19_06037 Tetracycline resistance protein, class C — —
Enterobacter asburiae PDN3 0.28 EX28DRAFT_2472 Membrane protein implicated in regulation of membrane protease activity 0.11 EX28DRAFT_2590 Arabinose efflux permease low > 76
Escherichia fergusonii Becca 0.28 EFB2_03567 Inner membrane protein YbbJ 0.10 EFB2_02921 Staphyloferrin B transporter low > 86
Escherichia coli Nissle 1917 0.27 ECOLIN_RS02890 NfeD family protein 0.10 ECOLIN_RS06115 multidrug efflux MFS transporter MdtG — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF4406 Putative activity regulator of membrane protease YbbK 0.14 GFF2532 12-TMS multidrug efflux protein homolog low > 78
Pantoea sp. MT58 0.24 IAI47_14390 NfeD family protein 0.09 IAI47_14975 multidrug efflux MFS transporter low > 76
Serratia liquefaciens MT49 0.24 IAI46_05320 NfeD family protein 0.11 IAI46_09665 multidrug efflux MFS transporter MdtG low > 86

Not shown: 17 genomes with orthologs for Xcc-8004.1566.1 only; 19 genomes with orthologs for Xcc-8004.5290.1 only