Conservation of cofitness between RR42_RS04970 and RR42_RS20450 in Cupriavidus basilensis FW507-4G11

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS04970 aspartyl beta-hydroxylase 1.0 RR42_RS20450 16S rRNA methyltransferase 0.57 13
Ralstonia sp. UNC404CL21Col 0.86 ABZR87_RS14255 lipid A hydroxylase LpxO 0.54 ABZR87_RS04950 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 80
Ralstonia solanacearum GMI1000 0.86 RS_RS09480 lipid A hydroxylase LpxO 0.52 RS_RS00375 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.48 8
Ralstonia solanacearum UW163 0.86 UW163_RS11400 lipid A hydroxylase LpxO 0.51 UW163_RS03790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB — —
Ralstonia solanacearum IBSBF1503 0.86 RALBFv3_RS02325 lipid A hydroxylase LpxO 0.51 RALBFv3_RS09790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 76
Ralstonia solanacearum PSI07 0.85 RPSI07_RS15045 lipid A hydroxylase LpxO 0.55 RPSI07_RS23575 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 81
Herbaspirillum seropedicae SmR1 0.70 HSERO_RS07265 aspartyl/asparaginyl beta-hydroxylase AspH 0.43 HSERO_RS00355 methyltransferase low > 78
Serratia liquefaciens MT49 0.67 IAI46_15695 lipid A hydroxylase LpxO 0.30 IAI46_23275 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 86
Dickeya dadantii 3937 0.65 DDA3937_RS17370 lipid A hydroxylase LpxO 0.29 DDA3937_RS19135 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 74
Acinetobacter radioresistens SK82 0.60 MPMX26_00227 hypothetical protein 0.25 MPMX26_03021 Ribosomal RNA small subunit methyltransferase B low > 36
Variovorax sp. OAS795 0.60 ABID97_RS22370 lipid A hydroxylase LpxO 0.35 ABID97_RS05360 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 91
Variovorax sp. SCN45 0.59 GFF1783 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO 0.36 GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) low > 127
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_25990 aspartyl beta-hydroxylase 0.29 AO353_10630 16S rRNA methyltransferase low > 101
Pseudomonas putida KT2440 0.57 PP_2423 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase 0.29 PP_0066 Ribosomal RNA small subunit methyltransferase B low > 96
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF1463 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO 0.31 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 low > 78
Pseudomonas fluorescens SBW25 0.57 PFLU_RS14180 lipid A hydroxylase LpxO 0.29 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 109
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS14180 lipid A hydroxylase LpxO 0.29 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 109
Pseudomonas simiae WCS417 0.56 PS417_13120 aspartyl beta-hydroxylase 0.29 PS417_00085 16S rRNA methyltransferase low > 88
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_3025 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO 0.28 PfGW456L13_652 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 87
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_27735 aspartyl beta-hydroxylase 0.28 AO356_11275 16S rRNA methyltransferase low > 104
Pseudomonas sp. RS175 0.55 PFR28_01700 hypothetical protein 0.28 PFR28_04663 Ribosomal RNA small subunit methyltransferase B low > 88
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_796 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO 0.29 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 103
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_4750 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO 0.29 Pf1N1B4_1914 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_1584 Aspartyl/Asparaginyl beta-hydroxylase 0.28 Psyr_0017 16S rRNA m(5)C-967 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_1584 Aspartyl/Asparaginyl beta-hydroxylase 0.28 Psyr_0017 16S rRNA m(5)C-967 methyltransferase low > 86

Not shown: 7 genomes with orthologs for RR42_RS04970 only; 45 genomes with orthologs for RR42_RS20450 only