Conservation of cofitness between RR42_RS04735 and RR42_RS13515 in Cupriavidus basilensis FW507-4G11

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS04735 hypothetical protein 1.0 RR42_RS13515 membrane protein 0.49 13
Ralstonia solanacearum PSI07 0.83 RPSI07_RS13685 YebC/PmpR family DNA-binding transcriptional regulator 0.71 RPSI07_RS15250 leucine efflux protein LeuE — —
Ralstonia solanacearum GMI1000 0.83 RS_RS10990 YebC/PmpR family DNA-binding transcriptional regulator 0.71 RS_RS07625 leucine efflux protein LeuE low > 80
Ralstonia solanacearum UW163 0.83 UW163_RS10130 YebC/PmpR family DNA-binding transcriptional regulator 0.70 UW163_RS15505 leucine efflux protein LeuE — —
Ralstonia solanacearum IBSBF1503 0.83 RALBFv3_RS03540 YebC/PmpR family DNA-binding transcriptional regulator 0.70 RALBFv3_RS02195 leucine efflux protein LeuE — —
Ralstonia sp. UNC404CL21Col 0.81 ABZR87_RS15405 YebC/PmpR family DNA-binding transcriptional regulator 0.73 ABZR87_RS14145 leucine efflux protein LeuE low > 80
Herbaspirillum seropedicae SmR1 0.79 HSERO_RS17750 transcriptional regulator 0.29 HSERO_RS23950 amino acid transporter LysE — —
Dechlorosoma suillum PS 0.72 Dsui_0489 DNA-binding regulatory protein, YebC/PmpR family 0.55 Dsui_3272 putative threonine efflux protein low > 51
Castellaniella sp019104865 MT123 0.68 ABCV34_RS02555 YebC/PmpR family DNA-binding transcriptional regulator 0.42 ABCV34_RS09900 leucine efflux protein LeuE — —
Variovorax sp. SCN45 0.65 GFF303 Probable transcriptional regulatory protein YebC 0.27 GFF3338 Threonine efflux protein low > 127
Variovorax sp. OAS795 0.65 ABID97_RS16740 YebC/PmpR family DNA-binding transcriptional regulator 0.27 ABID97_RS02915 LysE family transporter low > 91
Acidovorax sp. GW101-3H11 0.64 Ac3H11_2422 FIG000859: hypothetical protein 0.23 Ac3H11_4954 Threonine efflux protein — —
Serratia liquefaciens MT49 0.57 IAI46_14635 YebC/PmpR family DNA-binding transcriptional regulator 0.40 IAI46_04505 leucine efflux protein LeuE low > 86
Escherichia coli ECRC62 0.56 BNILDI_15490 putative transcriptional regulatory protein YebC 0.39 BNILDI_15940 leuE leucine efflux protein LeuE low > 75
Escherichia coli ECRC98 0.56 JDDGAC_00830 putative transcriptional regulatory protein YebC 0.39 JDDGAC_01210 leuE leucine efflux protein LeuE low > 86
Escherichia coli ECRC99 0.56 KEDOAH_01850 putative transcriptional regulatory protein YebC 0.39 KEDOAH_01475 leuE leucine efflux protein LeuE — —
Escherichia coli ECRC102 0.56 NIAGMN_01805 putative transcriptional regulatory protein YebC 0.39 NIAGMN_01430 leuE leucine efflux protein LeuE — —
Escherichia coli ECOR38 0.56 HEPCGN_04665 putative transcriptional regulatory protein YebC 0.39 HEPCGN_05025 leuE leucine efflux protein LeuE low > 87
Escherichia fergusonii Becca 0.56 EFB2_02078 putative transcriptional regulatory protein YebC 0.39 EFB2_02197 Leucine efflux protein low > 86
Escherichia coli Nissle 1917 0.56 ECOLIN_RS10380 YebC/PmpR family DNA-binding transcriptional regulator 0.39 ECOLIN_RS10020 leucine efflux protein LeuE — —
Escherichia coli ECRC100 0.56 OKFHMN_26255 putative transcriptional regulatory protein YebC 0.39 OKFHMN_26635 leuE leucine efflux protein LeuE low > 80
Escherichia coli BW25113 0.56 b1864 yebC hypothetical protein (NCBI) 0.39 b1798 yeaS neutral amino-acid efflux system (NCBI) low > 76
Escherichia coli ECRC101 0.56 MCAODC_19150 putative transcriptional regulatory protein YebC 0.39 MCAODC_18775 leuE leucine efflux protein LeuE low > 87
Escherichia coli BL21 0.56 ECD_01835 UPF0082 family protein 0.39 ECD_01768 leucine efflux protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_01864 putative transcriptional regulatory protein YebC 0.39 OHPLBJKB_01935 Leucine efflux protein low > 73
Escherichia coli ECOR27 0.56 NOLOHH_16700 putative transcriptional regulatory protein YebC 0.39 NOLOHH_17155 leuE leucine efflux protein LeuE low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF1645 FIG000859: hypothetical protein YebC 0.38 GFF3454 Putative transport protein low > 78
Enterobacter asburiae PDN3 0.56 EX28DRAFT_0693 DNA-binding regulatory protein, YebC/PmpR family 0.36 EX28DRAFT_0877 Putative threonine efflux protein low > 76
Enterobacter sp. TBS_079 0.55 MPMX20_02769 putative transcriptional regulatory protein YebC 0.36 MPMX20_02578 Leucine efflux protein low > 85
Klebsiella michiganensis M5al 0.55 BWI76_RS18160 YebC/PmpR family DNA-binding transcriptional regulator 0.38 BWI76_RS11410 leucine efflux protein — —
Acinetobacter radioresistens SK82 0.51 MPMX26_01851 putative transcriptional regulatory protein YebC 0.48 MPMX26_01754 Leucine efflux protein — —

Not shown: 71 genomes with orthologs for RR42_RS04735 only; 0 genomes with orthologs for RR42_RS13515 only