Conservation of cofitness between RR42_RS16925 and RR42_RS03285 in Cupriavidus basilensis FW507-4G11

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS16925 histidine utilization repressor 1.0 RR42_RS03285 tricarboxylic transport membrane protein 0.35 20
Acidovorax sp. GW101-3H11 0.69 Ac3H11_2559 Histidine utilization repressor 0.49 Ac3H11_112 Tricarboxylate transport protein TctC low > 79
Variovorax sp. OAS795 0.67 ABID97_RS03415 histidine utilization repressor 0.46 ABID97_RS19745 tripartite tricarboxylate transporter substrate-binding protein
Variovorax sp. SCN45 0.66 GFF6410 Histidine utilization repressor 0.50 GFF2606 Tripartite tricarboxylate transporter TctC family low > 127
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_0366 transcriptional regulator, GntR family 0.57 Psyr_3966 Uncharacterized protein UPF0065 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_0366 transcriptional regulator, GntR family 0.57 Psyr_3966 Uncharacterized protein UPF0065 low > 86
Pseudomonas putida KT2440 0.45 PP_5035 Histidine utilization repressor 0.57 PP_1418 putative Tricarboxylate transport protein TctC low > 96
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_329 Histidine utilization repressor 0.58 PfGW456L13_4526 Tricarboxylate transport protein TctC low > 87
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_1590 Histidine utilization repressor 0.58 Pf1N1B4_3313 Tricarboxylate transport protein TctC low > 87
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_12240 histidine utilization repressor 0.57 AO353_17580 tricarboxylic transporter low > 101
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_3807 Histidine utilization repressor 0.56 Pf6N2E2_2768 Tricarboxylate transport protein TctC low > 103
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_09640 histidine utilization repressor 0.57 AO356_04615 tricarboxylic transporter low > 104
Pseudomonas fluorescens SBW25 0.44 PFLU_RS01765 histidine utilization repressor 0.57 PFLU_RS07150 tripartite tricarboxylate transporter substrate binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS01765 histidine utilization repressor 0.57 PFLU_RS07150 tripartite tricarboxylate transporter substrate binding protein low > 109
Pseudomonas sp. RS175 0.44 PFR28_04963 HTH-type transcriptional repressor NagR 0.57 PFR28_00681 hypothetical protein low > 88
Pseudomonas simiae WCS417 0.44 PS417_01710 histidine utilization repressor 0.58 PS417_07075 tricarboxylic transport membrane protein low > 88
Klebsiella michiganensis M5al 0.43 BWI76_RS08730 histidine utilization repressor 0.61 BWI76_RS20035 hypothetical protein low > 92
Dickeya dadantii 3937 0.43 DDA3937_RS15020 histidine utilization repressor 0.62 DDA3937_RS14490 tripartite tricarboxylate transporter substrate binding protein low > 74
Pantoea sp. MT58 0.43 IAI47_13270 histidine utilization repressor 0.60 IAI47_06210 tripartite tricarboxylate transporter substrate binding protein low > 76
Dickeya dianthicola ME23 0.42 DZA65_RS15850 histidine utilization repressor 0.62 DZA65_RS15395 tripartite tricarboxylate transporter substrate binding protein low > 75
Dickeya dianthicola 67-19 0.41 HGI48_RS15100 histidine utilization repressor 0.62 HGI48_RS14460 tripartite tricarboxylate transporter substrate binding protein low > 71
Enterobacter sp. TBS_079 0.41 MPMX20_01398 HTH-type transcriptional repressor NagR 0.62 MPMX20_03193 hypothetical protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF665 Histidine utilization repressor 0.63 GFF1560 Tricarboxylate transport protein TctC low > 78
Serratia liquefaciens MT49 0.41 IAI46_10615 histidine utilization repressor 0.61 IAI46_17880 tripartite tricarboxylate transporter substrate binding protein low > 86
Pseudomonas sp. S08-1 0.40 OH686_16760 histidine utilization repressor 0.61 OH686_19995 Tripartite tricarboxylate transporter TctC family low > 80

Not shown: 22 genomes with orthologs for RR42_RS16925 only; 4 genomes with orthologs for RR42_RS03285 only