Conservation of cofitness between QEN71_RS03000 and QEN71_RS22240 in Paraburkholderia sabiae LMG 24235

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS03000 ATP-dependent Clp protease adapter ClpS 1.0 QEN71_RS22240 RNA polymerase sigma factor RpoS 0.68 14
Burkholderia phytofirmans PsJN 0.97 BPHYT_RS15715 ATP-dependent Clp protease adapter protein ClpS 0.85 BPHYT_RS09115 RNA polymerase sigma factor RpoS low > 109
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_04083 ATP-dependent Clp protease adaptor protein ClpS 0.83 H281DRAFT_00844 RNA polymerase, sigma 38 subunit, RpoS — —
Paraburkholderia graminis OAS925 0.97 ABIE53_003307 ATP-dependent Clp protease adaptor protein ClpS 0.83 ABIE53_002057 RNA polymerase nonessential primary-like sigma factor low > 113
Ralstonia solanacearum GMI1000 0.83 RS_RS12375 ATP-dependent Clp protease adaptor ClpS 0.67 RS_RS06045 RNA polymerase sigma factor RpoS 0.78 22
Ralstonia solanacearum IBSBF1503 0.82 RALBFv3_RS04815 ATP-dependent Clp protease adaptor ClpS 0.66 RALBFv3_RS15235 RNA polymerase sigma factor RpoS low > 76
Ralstonia solanacearum UW163 0.82 UW163_RS08855 ATP-dependent Clp protease adaptor ClpS 0.66 UW163_RS12700 RNA polymerase sigma factor RpoS — —
Ralstonia sp. UNC404CL21Col 0.82 ABZR87_RS00440 ATP-dependent Clp protease adapter ClpS 0.66 ABZR87_RS10875 RNA polymerase sigma factor RpoS low > 80
Ralstonia solanacearum PSI07 0.82 RPSI07_RS12570 ATP-dependent Clp protease adaptor ClpS 0.67 RPSI07_RS18140 RNA polymerase sigma factor RpoS 0.90 1
Herbaspirillum seropedicae SmR1 0.79 HSERO_RS07025 ATP-dependent Clp protease ClpS 0.52 HSERO_RS14830 RNA polymerase sigma factor RpoS low > 78
Variovorax sp. OAS795 0.72 ABID97_RS16915 ATP-dependent Clp protease adapter ClpS 0.36 ABID97_RS10730 sigma-70 family RNA polymerase sigma factor low > 91
Dechlorosoma suillum PS 0.67 Dsui_0008 hypothetical protein 0.45 Dsui_1971 RNA polymerase sigma factor RpoS low > 51
Pectobacterium carotovorum WPP14 0.53 HER17_RS12405 ATP-dependent Clp protease adapter ClpS 0.37 HER17_RS04350 RNA polymerase sigma factor RpoS low > 75
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_05800 ATP-dependent Clp protease adaptor ClpS 0.36 CSW01_02835 RNA polymerase sigma factor RpoS low > 62
Dickeya dadantii 3937 0.53 DDA3937_RS09555 ATP-dependent Clp protease adapter ClpS 0.37 DDA3937_RS16875 RNA polymerase sigma factor RpoS — —
Dickeya dianthicola 67-19 0.52 HGI48_RS09570 ATP-dependent Clp protease adapter ClpS 0.36 HGI48_RS16945 RNA polymerase sigma factor RpoS low > 71
Dickeya dianthicola ME23 0.52 DZA65_RS09880 ATP-dependent Clp protease adapter ClpS 0.37 DZA65_RS18020 RNA polymerase sigma factor RpoS low > 75
Escherichia coli ECOR27 0.52 NOLOHH_22185 clpS ATP-dependent Clp protease adapter ClpS 0.37 NOLOHH_12310 rpoS RNA polymerase sigma factor RpoS low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_02787 ATP-dependent Clp protease adapter protein ClpS 0.37 OHPLBJKB_00992 RNA polymerase sigma factor RpoS low > 73
Escherichia coli ECRC101 0.52 MCAODC_25005 clpS ATP-dependent Clp protease adapter ClpS 0.37 MCAODC_11020 rpoS RNA polymerase sigma factor RpoS low > 87
Escherichia coli ECRC102 0.52 NIAGMN_03830 clpS ATP-dependent Clp protease adapter ClpS 0.37 NIAGMN_18265 rpoS RNA polymerase sigma factor RpoS — —
Escherichia coli ECOR38 0.52 HEPCGN_22895 clpS ATP-dependent Clp protease adapter ClpS 0.37 HEPCGN_19675 rpoS RNA polymerase sigma factor RpoS low > 87
Klebsiella michiganensis M5al 0.52 BWI76_RS09610 ATP-dependent Clp protease adaptor ClpS 0.37 BWI76_RS22645 RNA polymerase sigma factor RpoS low > 92
Escherichia coli ECRC100 0.52 OKFHMN_05790 clpS ATP-dependent Clp protease adapter ClpS 0.37 OKFHMN_20495 rpoS RNA polymerase sigma factor RpoS low > 80
Escherichia fergusonii Becca 0.52 EFB2_03180 ATP-dependent Clp protease adapter protein ClpS 0.37 EFB2_01169 RNA polymerase sigma factor RpoS low > 86
Escherichia coli ECRC98 0.52 JDDGAC_09425 clpS ATP-dependent Clp protease adapter ClpS 0.37 JDDGAC_24160 rpoS RNA polymerase sigma factor RpoS low > 86
Escherichia coli ECRC62 0.52 BNILDI_20440 clpS ATP-dependent Clp protease adapter ClpS 0.37 BNILDI_10860 rpoS RNA polymerase sigma factor RpoS low > 75
Escherichia coli BL21 0.52 ECD_00886 regulatory protein for ClpA substrate specificity 0.37 ECD_02591 RNA polymerase, sigma S (sigma 38) factor low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF4902 ATP-dependent Clp protease adaptor protein ClpS 0.37 GFF4788 RNA polymerase sigma factor RpoS low > 78
Enterobacter sp. TBS_079 0.51 MPMX20_01543 ATP-dependent Clp protease adapter protein ClpS 0.37 MPMX20_03627 RNA polymerase sigma factor RpoS low > 85
Enterobacter asburiae PDN3 0.51 EX28DRAFT_2051 Uncharacterized conserved protein 0.37 EX28DRAFT_2837 RNA polymerase, sigma 38 subunit, RpoS low > 76
Serratia liquefaciens MT49 0.51 IAI46_08510 ATP-dependent Clp protease adapter ClpS 0.37 IAI46_03790 RNA polymerase sigma factor RpoS low > 86
Erwinia tracheiphila SCR3 0.50 LU632_RS09700 clpS ATP-dependent Clp protease adapter ClpS 0.35 LU632_RS06480 rpoS RNA polymerase sigma factor RpoS low > 74

Not shown: 40 genomes with orthologs for QEN71_RS03000 only; 1 genomes with orthologs for QEN71_RS22240 only