Conservation of cofitness between Psyr_3888 and Psyr_0600 in Pseudomonas syringae pv. syringae B728a

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3888 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase 1.0 Psyr_0600 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family 0.31 16
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3888 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase 1.00 Psyr_0600 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family low > 86
Pseudomonas simiae WCS417 0.92 PS417_05655 endonuclease III 0.90 PS417_02670 ABC transporter low > 88
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS05740 endonuclease III 0.91 PFLU_RS02740 ATP-binding cassette domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.92 PFLU_RS05740 endonuclease III 0.91 PFLU_RS02740 ATP-binding cassette domain-containing protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_04085 endonuclease III 0.89 AO353_13355 ABC transporter ATP-binding protein low > 101
Pseudomonas putida KT2440 0.90 PP_1092 DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites 0.87 PP_4864 High-affinity branched-chain amino acid transport ATP-binding protein BraF low > 96
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_18345 endonuclease III 0.90 AO356_08485 ABC transporter ATP-binding protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_739 Endonuclease III (EC 4.2.99.18) 0.88 Pf1N1B4_1379 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) low > 87
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_1753 Endonuclease III (EC 4.2.99.18) 0.88 PfGW456L13_121 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) low > 87
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_5594 Endonuclease III (EC 4.2.99.18) 0.90 Pf6N2E2_3577 ABC transporter for L-leucine/L-isoleucine/D-alanine, ATPase component 1 LivG (from data) low > 103
Pseudomonas sp. RS175 0.90 PFR28_03349 Endonuclease III 0.89 PFR28_05156 Glutamine transport ATP-binding protein GlnQ low > 88
Enterobacter asburiae PDN3 0.72 EX28DRAFT_1629 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)/endonuclease III (EC 3.2.2.-) 0.77 EX28DRAFT_0640 ABC-type branched-chain amino acid transport systems, ATPase component low > 76
Serratia liquefaciens MT49 0.71 IAI46_11455 endonuclease III 0.74 IAI46_17070 ATP-binding cassette domain-containing protein low > 86
Rahnella sp. WP5 0.71 EX31_RS06590 endonuclease III 0.76 EX31_RS15610 ATP-binding cassette domain-containing protein low > 89
Enterobacter sp. TBS_079 0.71 MPMX20_02005 Endonuclease III 0.77 MPMX20_02823 Lipopolysaccharide export system ATP-binding protein LptB low > 85
Shewanella loihica PV-4 0.68 Shew_2072 endonuclease III (RefSeq) 0.31 Shew_2611 ABC transporter-related protein (RefSeq) low > 60
Variovorax sp. OAS795 0.66 ABID97_RS17315 endonuclease III 0.41 ABID97_RS27570 ABC transporter ATP-binding protein low > 91
Castellaniella sp019104865 MT123 0.65 ABCV34_RS08465 endonuclease III 0.51 ABCV34_RS09110 ATP-binding cassette domain-containing protein — —
Azospirillum sp. SherDot2 0.61 MPMX19_02500 Endonuclease III 0.45 MPMX19_05498 Lipopolysaccharide export system ATP-binding protein LptB low > 112
Rhodospirillum rubrum S1H 0.56 Rru_A0153 Endonuclease III/Nth (NCBI) 0.46 Rru_A1749 ABC transporter component (NCBI) low > 58

Not shown: 74 genomes with orthologs for Psyr_3888 only; 2 genomes with orthologs for Psyr_0600 only