Conservation of cofitness between Psyr_5005 and Psyr_0290 in Pseudomonas syringae pv. syringae B728a

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_5005 protein of unknown function DUF945 1.0 Psyr_0290 ThiJ/PfpI 0.42 4
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_5005 protein of unknown function DUF945 1.00 Psyr_0290 ThiJ/PfpI low > 86
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_11370 hypothetical protein 0.81 AO353_08905 isoprenoid biosynthesis protein low > 101
Pseudomonas sp. S08-1 0.37 OH686_01915 GTP-binding protein 0.74 OH686_13980 Enhancing lycopene biosynthesis protein 2 low > 80
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_502 GTP-binding protein 0.85 PfGW456L13_870 Sigma cross-reacting protein 27A low > 87
Pseudomonas sp. DMC3 0.36 GFF4264 Protein YdgA 0.79 GFF339 Glyoxalase ElbB low > 89
Pseudomonas simiae WCS417 0.36 PS417_00735 hypothetical protein 0.84 PS417_27455 isoprenoid biosynthesis protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_1746 GTP-binding protein 0.86 Pf1N1B4_2204 Sigma cross-reacting protein 27A low > 87
Pseudomonas fluorescens SBW25 0.35 PFLU_RS00730 YdgA family protein 0.84 PFLU_RS29115 isoprenoid biosynthesis glyoxalase ElbB low > 109
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS00730 YdgA family protein 0.84 PFLU_RS29115 isoprenoid biosynthesis glyoxalase ElbB low > 109
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_10805 hypothetical protein 0.86 AO356_12875 isoprenoid biosynthesis protein low > 104
Pseudomonas lactucae CFBP13502 0.34 GEMAOFIL_00368 Protein YdgA 0.80 GEMAOFIL_05626 Glyoxalase ElbB low > 96
Pseudomonas sp. SVBP6 0.34 COO64_RS20210 YdgA family protein 0.77 COO64_RS01100 elbB isoprenoid biosynthesis glyoxalase ElbB low > 93
Pseudomonas sp. RS175 0.34 PFR28_04737 Protein YdgA 0.85 PFR28_04349 Glyoxalase ElbB low > 88
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_4033 GTP-binding protein 0.84 Pf6N2E2_4449 Sigma cross-reacting protein 27A low > 103
Pseudomonas orientalis W4I3 0.33 QF045_RS03710 YdgA family protein 0.79 QF045_RS01820 isoprenoid biosynthesis glyoxalase ElbB low > 93
Pseudomonas putida KT2440 0.29 PP_1230 conserved exported protein of unknown function 0.80 PP_5220 putative hydrolase low > 96
Pseudomonas sp. BP01 0.28 JOY50_RS01745 YdgA family protein 0.82 JOY50_RS22560 elbB isoprenoid biosynthesis glyoxalase ElbB low > 84
Pseudomonas stutzeri RCH2 0.18 Psest_0041 Uncharacterized protein conserved in bacteria 0.70 Psest_3734 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis low > 67
Pectobacterium carotovorum WPP14 0.17 HER17_RS10765 YdgA family protein 0.60 HER17_RS19895 isoprenoid biosynthesis glyoxalase ElbB low > 75
Serratia liquefaciens MT49 0.16 IAI46_11640 YdgA family protein 0.57 IAI46_22330 isoprenoid biosynthesis glyoxalase ElbB low > 87
Escherichia coli Nissle 1917 0.15 ECOLIN_RS09010 YdgA family protein 0.57 ECOLIN_RS18460 isoprenoid biosynthesis glyoxalase ElbB low > 55
Escherichia fergusonii Becca 0.15 EFB2_02378 Protein YdgA 0.57 EFB2_00614 Glyoxalase ElbB low > 86
Escherichia coli BW25113 0.15 b1614 ydgA hypothetical protein (NCBI) 0.57 b3209 yhbL sigma cross-reacting protein 27A (SCRP-27A) (VIMSS) low > 76
Escherichia coli BL21 0.15 ECD_01583 DUF945 family protein 0.57 ECD_03074 isoprenoid biosynthesis protein with amidotransferase-like domain — —
Escherichia coli ECRC99 0.15 KEDOAH_00470 ydgA Protein YdgA 0.57 KEDOAH_10245 elbB isoprenoid biosynthesis glyoxalase ElbB — —
Escherichia coli ECRC98 0.15 JDDGAC_02225 ydgA Protein YdgA 0.57 JDDGAC_21530 elbB isoprenoid biosynthesis glyoxalase ElbB low > 87
Escherichia coli ECRC100 0.15 OKFHMN_27635 ydgA Protein YdgA 0.57 OKFHMN_17905 elbB isoprenoid biosynthesis glyoxalase ElbB low > 79
Escherichia coli ECOR38 0.15 HEPCGN_06010 ydgA Protein YdgA 0.57 HEPCGN_16780 elbB isoprenoid biosynthesis glyoxalase ElbB low > 88
Escherichia coli ECRC102 0.15 NIAGMN_00440 ydgA Protein YdgA 0.57 NIAGMN_15665 elbB isoprenoid biosynthesis glyoxalase ElbB — —
Escherichia coli ECRC101 0.14 MCAODC_17775 ydgA Protein YdgA 0.57 MCAODC_08425 elbB isoprenoid biosynthesis glyoxalase ElbB low > 87
Escherichia coli ECOR27 0.14 NOLOHH_18140 ydgA Protein YdgA 0.57 NOLOHH_09705 elbB isoprenoid biosynthesis glyoxalase ElbB — —
Escherichia coli ECRC62 0.14 BNILDI_16930 ydgA Protein YdgA 0.57 BNILDI_01830 elbB isoprenoid biosynthesis glyoxalase ElbB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.14 OHPLBJKB_02112 Protein YdgA 0.57 OHPLBJKB_00491 Glyoxalase ElbB low > 74
Klebsiella pneumoniae MKP103 0.14 KDGMDA_20925 GTP-binding protein YdgA 0.56 KDGMDA_06110 isoprenoid biosynthesis glyoxalase ElbB low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.14 GFF1809 Putative GTP-binding protein YdgA 0.57 GFF2953 Sigma cross-reacting protein 27A low > 78
Enterobacter sp. TBS_079 0.13 MPMX20_02019 Protein YdgA 0.59 MPMX20_04114 Glyoxalase ElbB low > 85
Enterobacter asburiae PDN3 0.13 EX28DRAFT_1611 Uncharacterized protein conserved in bacteria 0.58 EX28DRAFT_3262 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis low > 76
Klebsiella michiganensis M5al 0.13 BWI76_RS16285 hypothetical protein 0.57 BWI76_RS25295 glutamine amidotransferase low > 92
Dickeya dadantii 3937 0.13 DDA3937_RS10645 YdgA family protein 0.57 DDA3937_RS01680 isoprenoid biosynthesis glyoxalase ElbB low > 74
Dickeya dianthicola ME23 0.12 DZA65_RS11115 YdgA family protein 0.57 DZA65_RS01650 isoprenoid biosynthesis glyoxalase ElbB low > 75
Dickeya dianthicola 67-19 0.12 HGI48_RS10645 YdgA family protein 0.57 HGI48_RS01575 isoprenoid biosynthesis glyoxalase ElbB low > 71

Not shown: 7 genomes with orthologs for Psyr_5005 only; 15 genomes with orthologs for Psyr_0290 only