Conservation of cofitness between Psyr_4909 and Psyr_0091 in Pseudomonas syringae pv. syringae B728a

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4909 gamma-aminobutyrate:proton symporter, AAT family 1.0 Psyr_0091 succinate semialdehyde dehydrogenase 0.49 5
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4909 gamma-aminobutyrate:proton symporter, AAT family 1.00 Psyr_0091 succinate semialdehyde dehydrogenase low > 86
Pseudomonas simiae WCS417 0.89 PS417_01505 gamma-aminobutyrate transporter 0.91 PS417_00895 succinate-semialdehyde dehydrogenase low > 88
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS01545 GABA permease 0.91 PFLU_RS00910 NADP-dependent succinate-semialdehyde dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.89 PFLU_RS01545 GABA permease 0.91 PFLU_RS00910 NADP-dependent succinate-semialdehyde dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_12005 GABA permease 0.90 AO353_11505 succinate-semialdehyde dehydrogenase (EC 1.2.1.16) (from data) low > 101
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_375 transport permease protein of gamma-aminobutyrate 0.90 PfGW456L13_495 Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) (from data) low > 87
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_4195 transport permease protein of gamma-aminobutyrate 0.91 Pf6N2E2_4014 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 103
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_1639 transport permease protein of gamma-aminobutyrate 0.91 Pf1N1B4_1734 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 87
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_11625 GABA permease 0.91 AO356_10720 succinate-semialdehyde dehydrogenase low > 104
Pseudomonas sp. RS175 0.81 PFR28_04595 GABA permease 0.91 PFR28_04755 Glutarate-semialdehyde dehydrogenase 0.44 4
Pseudomonas putida KT2440 0.79 PP_0284 gamma-aminobutyrate permease 0.90 PP_0213 succinate-semialdehyde dehydrogenase (NADP+) low > 96
Escherichia coli BL21 0.67 ECD_02519 gamma-aminobutyrate transporter 0.82 ECD_02517 succinate-semialdehyde dehydrogenase I, NADP-dependent low > 61
Escherichia coli ECRC102 0.67 NIAGMN_18670 gabP GABA permease 0.82 NIAGMN_18680 gabD NADP-dependent succinate-semialdehyde dehydrogenase — —
Escherichia coli ECRC100 0.67 OKFHMN_20905 gabP GABA permease 0.82 OKFHMN_20915 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 80
Escherichia coli ECRC99 0.67 KEDOAH_07235 gabP GABA permease 0.82 KEDOAH_07225 gabD NADP-dependent succinate-semialdehyde dehydrogenase — —
Escherichia coli ECRC101 0.67 MCAODC_11425 gabP GABA permease 0.82 MCAODC_11435 gabD NADP-dependent succinate-semialdehyde dehydrogenase 0.41 54
Escherichia coli ECRC98 0.67 JDDGAC_24565 gabP GABA permease 0.82 JDDGAC_24575 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 86
Escherichia coli Nissle 1917 0.67 ECOLIN_RS14850 GABA permease 0.80 ECOLIN_RS14840 NADP-dependent succinate-semialdehyde dehydrogenase — —
Escherichia coli ECOR38 0.67 HEPCGN_20160 gabP GABA permease 0.82 HEPCGN_20150 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 87
Escherichia coli BW25113 0.67 b2663 gabP gamma-aminobutyrate transporter (NCBI) 0.82 b2661 gabD succinate-semialdehyde dehydrogenase I, NADP-dependent (NCBI) 0.25 19
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_01069 GABA permease 0.82 OHPLBJKB_01071 Succinate-semialdehyde dehydrogenase [NADP(+)] GabD low > 73
Escherichia coli ECOR27 0.67 NOLOHH_12730 gabP GABA permease 0.82 NOLOHH_12740 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 75
Escherichia fergusonii Becca 0.67 EFB2_01267 GABA permease 0.80 EFB2_01269 Succinate-semialdehyde dehydrogenase [NADP(+)] GabD low > 86
Escherichia coli ECRC62 0.67 BNILDI_11290 gabP GABA permease 0.82 BNILDI_11300 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF1568 gamma-aminobutyrate (GABA) permease 0.82 GFF1566 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 78
Acinetobacter radioresistens SK82 0.56 MPMX26_01988 GABA permease 0.65 MPMX26_01991 Glutarate-semialdehyde dehydrogenase low > 36
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS31450 amino acid permease 0.71 QEN71_RS11690 NADP-dependent succinate-semialdehyde dehydrogenase low > 153
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS21680 amino acid permease-associated protein 0.67 BPHYT_RS22430 succinate-semialdehyde dehydrogenase low > 109
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS33780 GABA permease 0.73 RR42_RS21760 succinate-semialdehyde dehydrogenase low > 128
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_01668 gamma-aminobutyrate:proton symporter, AAT family 0.68 H281DRAFT_02680 succinate semialdehyde dehydrogenase low > 103
Ralstonia solanacearum GMI1000 0.29 RS_RS08880 amino acid permease 0.64 RS_RS00140 NAD-dependent succinate-semialdehyde dehydrogenase low > 80
Ralstonia solanacearum PSI07 0.28 RPSI07_RS16340 amino acid permease 0.66 RPSI07_RS20435 NAD-dependent succinate-semialdehyde dehydrogenase low > 81

Not shown: 6 genomes with orthologs for Psyr_4909 only; 48 genomes with orthologs for Psyr_0091 only