Conservation of cofitness between PP_5338 and PP_5337 in Pseudomonas putida KT2440

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5338 aspartate ammonia-lyase 1.0 PP_5337 LysR family transcriptional regulator 0.64 1
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_4085 Aspartate ammonia-lyase (EC 4.3.1.1) 0.89 Pf6N2E2_4084 Transcriptional regulator — —
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_11090 aspartate ammonia-lyase 0.90 AO356_11085 LysR family transcriptional regulator 0.84 1
Pseudomonas sp. RS175 0.93 PFR28_04498 Aspartate ammonia-lyase 0.90 PFR28_04497 HTH-type transcriptional regulator YjiE 0.66 1
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_2025 Aspartate ammonia-lyase (EC 4.3.1.1) 0.90 Pf1N1B4_2026 Transcriptional regulator — —
Pseudomonas simiae WCS417 0.93 PS417_28130 aspartate ammonia-lyase 0.91 PS417_28125 LysR family transcriptional regulator — —
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_09950 aspartate ammonia-lyase 0.90 AO353_09945 LysR family transcriptional regulator 0.47 1
Pseudomonas fluorescens SBW25 0.93 PFLU_RS29815 aspartate ammonia-lyase 0.91 PFLU_RS29810 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS29815 aspartate ammonia-lyase 0.91 PFLU_RS29810 LysR family transcriptional regulator 0.71 1
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_742 Aspartate ammonia-lyase (EC 4.3.1.1) 0.90 PfGW456L13_743 Transcriptional regulator 0.77 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.92 Psyr_5051 Aspartate ammonia-lyase 0.90 Psyr_5050 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.92 Psyr_5051 Aspartate ammonia-lyase 0.90 Psyr_5050 transcriptional regulator, LysR family low > 86
Pseudomonas sp. S08-1 0.88 OH686_13315 Aspartate ammonia-lyase 0.78 OH686_13320 LysR-family transcriptional regulator — —
Pseudomonas stutzeri RCH2 0.84 Psest_4074 Aspartate ammonia-lyase 0.80 Psest_4073 Transcriptional regulator — —
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS26135 aspartate ammonia-lyase 0.35 RR42_RS29580 LysR family transcriptional regulator low > 128
Azospirillum sp. SherDot2 0.57 MPMX19_03594 Aspartate ammonia-lyase 0.22 MPMX19_05675 HTH-type transcriptional regulator YjiE low > 112
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS33820 aspartate ammonia-lyase 0.33 QEN71_RS33805 LysR substrate-binding domain-containing protein low > 153
Agrobacterium fabrum C58 0.53 Atu3793 aspartate ammonia-lyase 0.30 Atu2512 transcriptional regulator, LysR family low > 89
Rahnella sp. WP5 0.53 EX31_RS08965 aspartate ammonia-lyase 0.28 EX31_RS05520 LysR family transcriptional regulator low > 89
Variovorax sp. SCN45 0.52 GFF4594 Aspartate ammonia-lyase (EC 4.3.1.1) 0.33 GFF4595 Transcriptional regulator low > 127
Escherichia coli ECOR38 0.52 HEPCGN_10655 aspA aspartate ammonia-lyase 0.31 HEPCGN_09540 hypT hypochlorite stress DNA-binding transcriptional regulator HypT low > 85
Escherichia fergusonii Becca 0.52 EFB2_04396 Aspartate ammonia-lyase 0.31 EFB2_04117 HTH-type transcriptional regulator YjiE low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_03904 Aspartate ammonia-lyase 0.31 OHPLBJKB_03739 HTH-type transcriptional regulator YjiE low > 73
Escherichia coli BL21 0.52 ECD_04009 aspartate ammonia-lyase 0.31 ECD_04196 hypochlorite-responsive transcription factor low > 60
Escherichia coli Nissle 1917 0.52 ECOLIN_RS24045 aspartate ammonia-lyase 0.31 ECOLIN_RS24870 hypochlorite stress DNA-binding transcriptional regulator HypT low > 52
Escherichia coli ECRC62 0.52 BNILDI_06795 aspA aspartate ammonia-lyase 0.31 BNILDI_07735 hypT hypochlorite stress DNA-binding transcriptional regulator HypT — —
Escherichia coli BW25113 0.52 b4139 aspA aspartate ammonia-lyase (aspartase) (VIMSS) 0.31 b4327 yjiE predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECOR27 0.52 NOLOHH_04695 aspA aspartate ammonia-lyase 0.31 NOLOHH_03860 hypT hypochlorite stress DNA-binding transcriptional regulator HypT — —
Variovorax sp. OAS795 0.52 ABID97_RS05930 aspartate ammonia-lyase 0.34 ABID97_RS05925 LysR substrate-binding domain-containing protein low > 91
Pectobacterium carotovorum WPP14 0.52 HER17_RS18835 aspartate ammonia-lyase 0.29 HER17_RS14225 hypochlorite stress DNA-binding transcriptional regulator HypT low > 75
Klebsiella michiganensis M5al 0.52 BWI76_RS02330 aspartate ammonia-lyase 0.28 BWI76_RS17610 LysR family transcriptional regulator low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF2013 Aspartate ammonia-lyase (EC 4.3.1.1) 0.30 GFF984 LysR family transcriptional regulator QseA low > 78
Dickeya dianthicola ME23 0.51 DZA65_RS02850 aspartate ammonia-lyase 0.31 DZA65_RS07765 hypochlorite stress DNA-binding transcriptional regulator HypT low > 75
Dickeya dianthicola 67-19 0.51 HGI48_RS02695 aspartate ammonia-lyase 0.31 HGI48_RS07255 hypochlorite stress DNA-binding transcriptional regulator HypT low > 71
Dickeya dadantii 3937 0.51 DDA3937_RS02720 aspartate ammonia-lyase 0.30 DDA3937_RS07390 hypochlorite stress DNA-binding transcriptional regulator HypT low > 74

Not shown: 23 genomes with orthologs for PP_5338 only; 18 genomes with orthologs for PP_5337 only