Conservation of cofitness between PP_4224 and PP_5229 in Pseudomonas putida KT2440

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4224 Sensor histidine kinase 1.0 PP_5229 conserved protein of unknown function 0.17 20
Pseudomonas sp. RS175 0.65 PFR28_01031 Sensor protein QseC 0.70 PFR28_04377 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_2396 Sensor histidine kinase 0.73 Pf6N2E2_4417 Protein of unknown function DUF484 low > 103
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS21480 two-component sensor histidine kinase 0.74 PFLU_RS29275 DUF484 family protein low > 109
Pseudomonas fluorescens SBW25 0.63 PFLU_RS21480 two-component sensor histidine kinase 0.74 PFLU_RS29275 DUF484 family protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_207 Sensor histidine kinase 0.71 Pf1N1B4_2172 Protein of unknown function DUF484 — —
Pseudomonas simiae WCS417 0.62 PS417_19515 histidine kinase 0.71 PS417_27590 hypothetical protein low > 88
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_2300 Sensor histidine kinase 0.72 PfGW456L13_843 Protein of unknown function DUF484 low > 87
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_19375 histidine kinase 0.72 AO353_09045 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.61 AO356_02860 histidine kinase 0.74 AO356_12730 hypothetical protein low > 104
Pseudomonas stutzeri RCH2 0.53 Psest_1601 Signal transduction histidine kinase 0.67 Psest_3766 Uncharacterized protein conserved in bacteria low > 67
Alteromonas macleodii MIT1002 0.26 MIT1002_03259 Sensor protein QseC 0.18 MIT1002_00158 hypothetical protein low > 70
Escherichia coli ECOR38 0.20 HEPCGN_17735 qseC two-component system sensor histidine kinase QseC 0.13 HEPCGN_13130 yigA Uncharacterized protein YigA low > 87
Escherichia coli ECRC99 0.20 KEDOAH_09270 qseC two-component system sensor histidine kinase QseC 0.13 KEDOAH_13725 yigA Uncharacterized protein YigA — —
Escherichia coli ECOR27 0.20 NOLOHH_10655 qseC two-component system sensor histidine kinase QseC 0.13 NOLOHH_06555 yigA Uncharacterized protein YigA low > 75
Escherichia coli ECRC101 0.20 MCAODC_09390 qseC two-component system sensor histidine kinase QseC 0.13 MCAODC_04930 yigA Uncharacterized protein YigA low > 87
Escherichia coli ECRC62 0.20 BNILDI_00860 qseC two-component system sensor histidine kinase QseC 0.13 BNILDI_04980 yigA Uncharacterized protein YigA low > 75
Escherichia coli ECRC98 0.20 JDDGAC_22510 qseC two-component system sensor histidine kinase QseC 0.13 JDDGAC_18050 yigA Uncharacterized protein YigA low > 86
Escherichia coli ECRC102 0.20 NIAGMN_16640 qseC two-component system sensor histidine kinase QseC 0.13 NIAGMN_12180 yigA Uncharacterized protein YigA — —
Escherichia coli ECRC100 0.20 OKFHMN_18875 qseC two-component system sensor histidine kinase QseC 0.13 OKFHMN_14425 yigA Uncharacterized protein YigA low > 80
Escherichia coli BW25113 0.20 b3026 qseC sensory histidine kinase in two-component regulatory system with QseB (NCBI) 0.13 b3810 yigA hypothetical protein (NCBI) low > 76
Escherichia coli BL21 0.20 ECD_02898 quorum sensing sensory histidine kinase in two-component regulatory system with QseB 0.13 ECD_03686 DUF484 family protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_00676 Sensor protein QseC 0.13 OHPLBJKB_04240 hypothetical protein low > 73
Escherichia coli Nissle 1917 0.20 ECOLIN_RS17430 quorum sensing histidine kinase QseC 0.14 ECOLIN_RS21870 DUF484 domain-containing protein low > 55
Escherichia fergusonii Becca 0.19 EFB2_00787 Sensor protein QseC 0.14 EFB2_04827 hypothetical protein low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF3139 Sensory histidine kinase QseC 0.16 GFF238 Protein of unknown function DUF484 low > 78
Paraburkholderia bryophila 376MFSha3.1 0.17 H281DRAFT_01149 two-component system, OmpR family, sensor histidine kinase QseC 0.14 H281DRAFT_02201 hypothetical protein low > 103
Rhodanobacter denitrificans MT42 0.16 LRK55_RS13870 ATP-binding protein 0.22 LRK55_RS08305 DUF484 family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.16 LRK54_RS14150 ATP-binding protein 0.23 LRK54_RS08540 DUF484 family protein low > 59
Klebsiella michiganensis M5al 0.16 BWI76_RS24340 two-component sensor histidine kinase 0.13 BWI76_RS01205 DUF484 family protein low > 92
Rhodanobacter sp. FW510-T8 0.15 OKGIIK_00865 Sensor protein QseC 0.22 OKGIIK_15330 DUF484 domain-containing protein low > 52

Not shown: 3 genomes with orthologs for PP_4224 only; 33 genomes with orthologs for PP_5229 only