Conservation of cofitness between PP_5135 and PP_4778 in Pseudomonas putida KT2440

25 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Pseudomonas putida KT2440	1.0	PP_5135		ABC transporter, periplasmic binding protein	1.0	PP_4778		23S rRNA pseudouridine 2457 synthase	0.16	8
Pseudomonas fluorescens FW300-N2E3	0.91	AO353_08400		phosphonate ABC transporter substrate-binding protein	0.86	AO353_06330		pseudouridine synthase	low	> 101
Pseudomonas fluorescens GW456-L13	0.90	PfGW456L13_963		Ferric iron ABC transporter, iron-binding protein	0.85	PfGW456L13_1389		Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70)	low	> 87
Pseudomonas fluorescens FW300-N1B4	0.89	Pf1N1B4_2295		Ferric iron ABC transporter, iron-binding protein	0.86	Pf1N1B4_2722		Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70)	low	> 87
Pseudomonas fluorescens SBW25	0.88	PFLU_RS28595		putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	0.85	PFLU_RS26510		pseudouridine synthase	low	> 109
Pseudomonas fluorescens SBW25-INTG	0.88	PFLU_RS28595		putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	0.85	PFLU_RS26510		pseudouridine synthase	low	> 109
Pseudomonas simiae WCS417	0.87	PS417_26935		phosphonate ABC transporter substrate-binding protein	0.84	PS417_24580		pseudouridine synthase	low	> 88
Pseudomonas sp. RS175	0.76	PFR28_01940		hypothetical protein	0.86	PFR28_03839		Ribosomal large subunit pseudouridine synthase E	low	> 88
Herbaspirillum seropedicae SmR1	0.72	HSERO_RS11135		phosphonate ABC transporter substrate-binding protein	0.49	HSERO_RS07010		pseudouridine synthase	low	> 78
Castellaniella sp019104865 MT123	0.65	ABCV34_RS14670		putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	0.72	ABCV34_RS13900		pseudouridine synthase	low	> 48
Variovorax sp. SCN45	0.63	GFF5217		Ferric iron ABC transporter, iron-binding protein	0.55	GFF6670		LSU rRNA pseudouridine(2457) synthase (EC 5.4.99.20)	low	> 127
Paraburkholderia sabiae LMG 24235	0.60	QEN71_RS20800		putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	0.49	QEN71_RS02975		pseudouridine synthase	low	> 153
Azospirillum sp. SherDot2	0.57	MPMX19_05147		hypothetical protein	0.60	MPMX19_00077		Ribosomal large subunit pseudouridine synthase E	low	> 112
Vibrio cholerae E7946 ATCC 55056	0.46	CSW01_17235		putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	0.60	CSW01_05785		23S rRNA pseudouridine synthase E	low	> 62
Escherichia coli ECRC102	0.23	NIAGMN_06775	afuA	Bacterial extracellular solute-binding protein	0.57	NIAGMN_24900	rluE	23S rRNA pseudouridine(2457) synthase RluE	—	—
Escherichia coli ECRC101	0.23	OKFHMN_08720	afuA	Bacterial extracellular solute-binding protein	0.57	OKFHMN_00755	rluE	23S rRNA pseudouridine(2457) synthase RluE	—	—
Escherichia coli ECRC101	0.23	MCAODC_27950	afuA	Bacterial extracellular solute-binding protein	0.57	MCAODC_22330	rluE	23S rRNA pseudouridine(2457) synthase RluE	—	—
Escherichia coli ECRC99	0.23	KEDOAH_19250	afuA	Bacterial extracellular solute-binding protein	0.57	KEDOAH_24840	rluE	23S rRNA pseudouridine(2457) synthase RluE	—	—
Escherichia coli ECRC98	0.23	JDDGAC_12375	afuA	Bacterial extracellular solute-binding protein	0.57	JDDGAC_06610	rluE	23S rRNA pseudouridine(2457) synthase RluE	—	—
Klebsiella michiganensis M5al	0.22	BWI76_RS06045		hypothetical protein	0.58	BWI76_RS11325		23S rRNA pseudouridine synthase E	—	—
Pectobacterium carotovorum WPP14	0.21	HER17_RS14260		ABC transporter substrate-binding protein	0.53	HER17_RS11615		23S rRNA pseudouridine(2457) synthase RluE	low	> 75
Serratia liquefaciens MT49	0.20	IAI46_16655		ABC transporter substrate-binding protein	0.53	IAI46_10455		23S rRNA pseudouridine(2457) synthase RluE	low	> 86
Pantoea sp. MT58	0.19	IAI47_09875		ABC transporter substrate-binding protein	0.56	IAI47_11905		23S rRNA pseudouridine(2457) synthase RluE	low	> 76
Acidovorax sp. GW101-3H11	0.18	Ac3H11_2056		Ferric iron ABC transporter, iron-binding protein	0.57	Ac3H11_10		Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70)	low	> 79
Rahnella sp. WP5	0.18	EX31_RS07005		ABC transporter substrate-binding protein	0.55	EX31_RS24585		23S rRNA pseudouridine(2457) synthase RluE	low	> 89
Rhodospirillum rubrum S1H	0.14	Rru_A3199		extracellular solute-binding protein, family 1 (NCBI)	0.52	Rru_A1939		Pseudouridine synthase, Rsu (NCBI)	low	> 58

Not shown: 11 genomes with orthologs for PP_5135 only; 37 genomes with orthologs for PP_4778 only