Conservation of cofitness between PP_2682 and PP_4565 in Pseudomonas putida KT2440

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2682 Fe-containing alcohol dehydrogenase 1.0 PP_4565 Isocitrate dehydrogenase kinase/phosphatase 0.26 19
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_22415 alcohol dehydrogenase 0.82 AO353_18220 isocitrate dehydrogenase 0.22 83
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_3512 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 0.81 PfGW456L13_4468 Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) low > 87
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_4506 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 0.82 Pf1N1B4_3387 Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) low > 87
Pseudomonas simiae WCS417 0.93 PS417_17420 ethanol oxidation regulatory protein ercA (from data) 0.80 PS417_20580 isocitrate dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_28020 ethanol oxidation regulatory protein ercA (from data) 0.81 AO356_04285 isocitrate dehydrogenase low > 104
Pseudomonas sp. RS175 0.93 PFR28_01820 1,3-propanediol dehydrogenase 0.82 PFR28_00738 Isocitrate dehydrogenase kinase/phosphatase low > 88
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_1380 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 0.81 Pf6N2E2_2696 Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) — —
Pseudomonas stutzeri RCH2 0.84 Psest_2268 Alcohol dehydrogenase, class IV 0.80 Psest_1857 Isocitrate dehydrogenase kinase/phosphatase low > 67
Pseudomonas fluorescens SBW25 0.36 PFLU_RS06965 L-threonine dehydrogenase 0.80 PFLU_RS22290 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 109
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS06965 L-threonine dehydrogenase 0.80 PFLU_RS22290 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 109
Rahnella sp. WP5 0.35 EX31_RS00895 iron-containing alcohol dehydrogenase 0.43 EX31_RS11750 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 89
Rhodopseudomonas palustris CGA009 0.35 TX73_006190 L-threonine dehydrogenase 0.19 TX73_001800 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 86
Dickeya dianthicola 67-19 0.34 HGI48_RS11990 L-threonine dehydrogenase 0.42 HGI48_RS19140 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 71
Dickeya dadantii 3937 0.34 DDA3937_RS11900 L-threonine dehydrogenase 0.42 DDA3937_RS19050 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 74
Escherichia coli Nissle 1917 0.34 ECOLIN_RS20505 L-threonine dehydrogenase 0.41 ECOLIN_RS23150 bifunctional isocitrate dehydrogenase kinase/phosphatase — —
Dickeya dianthicola ME23 0.34 DZA65_RS12440 L-threonine dehydrogenase 0.43 DZA65_RS20260 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 75
Serratia liquefaciens MT49 0.33 IAI46_19495 L-threonine dehydrogenase 0.44 IAI46_23185 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 86
Escherichia coli ECOR38 0.33 HEPCGN_14690 yiaY L-threonine dehydrogenase 0.41 HEPCGN_11895 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase low > 85
Escherichia fergusonii Becca 0.33 EFB2_00220 Alcohol dehydrogenase 2 0.41 EFB2_04594 Isocitrate dehydrogenase kinase/phosphatase low > 86
Escherichia coli ECRC101 0.33 MCAODC_06370 yiaY L-threonine dehydrogenase 0.41 MCAODC_03755 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase — —
Escherichia coli ECOR27 0.33 NOLOHH_07750 yiaY L-threonine dehydrogenase 0.41 NOLOHH_05395 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase low > 57
Escherichia coli ECRC99 0.33 KEDOAH_12295 yiaY L-threonine dehydrogenase 0.41 KEDOAH_14905 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase — —
Escherichia coli BL21 0.33 ECD_03444 L-threonine dehydrogenase 0.41 ECD_03888 isocitrate dehydrogenase kinase/phosphatase low > 60
Escherichia coli BW25113 0.33 b3589 yiaY predicted Fe-containing alcohol dehydrogenase (NCBI) 0.41 b4016 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase protein (NCBI) low > 76
Escherichia coli ECRC98 0.33 JDDGAC_19485 yiaY L-threonine dehydrogenase 0.41 JDDGAC_16880 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase — —
Escherichia coli ECRC102 0.33 NIAGMN_13615 yiaY L-threonine dehydrogenase 0.41 NIAGMN_11005 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_00114 Alcohol dehydrogenase 2 0.41 OHPLBJKB_04034 Isocitrate dehydrogenase kinase/phosphatase low > 73
Escherichia coli ECRC62 0.33 BNILDI_03780 yiaY L-threonine dehydrogenase 0.41 BNILDI_06125 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase — —
Escherichia coli ECRC101 0.33 OKFHMN_15855 yiaY L-threonine dehydrogenase 0.41 OKFHMN_13255 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase — —
Pantoea sp. MT58 0.31 IAI47_20590 lactaldehyde reductase 0.39 IAI47_18000 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF4855 Lactaldehyde reductase (EC 1.1.1.77) 0.42 GFF1354 Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) low > 78
Pectobacterium carotovorum WPP14 0.30 HER17_RS18010 lactaldehyde reductase 0.44 HER17_RS02300 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 75
Klebsiella michiganensis M5al 0.29 BWI76_RS00645 lactaldehyde reductase 0.41 BWI76_RS01670 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 92

Not shown: 16 genomes with orthologs for PP_2682 only; 21 genomes with orthologs for PP_4565 only