Conservation of cofitness between PP_2214 and PP_4403 in Pseudomonas putida KT2440

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2214 3-hydroxyacyl-CoA dehydrogenase type-2 1.0 PP_4403 Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex 0.29 14
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS14760 SDR family NAD(P)-dependent oxidoreductase 0.71 PFLU_RS19365 2-oxo acid dehydrogenase subunit E2 0.49 4
Pseudomonas fluorescens SBW25 0.80 PFLU_RS14760 SDR family NAD(P)-dependent oxidoreductase 0.71 PFLU_RS19365 2-oxo acid dehydrogenase subunit E2 low > 109
Pseudomonas sp. RS175 0.76 PFR28_01881 putative oxidoreductase 0.68 PFR28_02447 Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex 0.46 9
Pseudomonas simiae WCS417 0.75 PS417_13860 3-hydroxy-2-methylbutyryl-CoA dehydrogenase 0.71 PS417_17555 branched-chain alpha-keto acid dehydrogenase subunit E2 — —
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_2981 Probable acyl-CoA dehydrogenase (EC 1.3.99.3) 0.71 PfGW456L13_3542 Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) (from data) low > 87
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_1144 Probable acyl-CoA dehydrogenase (EC 1.3.99.3) 0.70 Pf6N2E2_479 Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) (from data) — —
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_25690 3-hydroxy-2-methylbutyryl-CoA dehydrogenase 0.70 AO353_26645 branched-chain alpha-keto acid dehydrogenase subunit E2 — —
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_26345 3-hydroxy-2-methylbutyryl-CoA dehydrogenase 0.68 AO356_22980 branched-chain alpha-keto acid dehydrogenase subunit E2 0.37 19
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_4785 Probable acyl-CoA dehydrogenase (EC 1.3.99.3) 0.72 Pf1N1B4_4478 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) — —
Sinorhizobium meliloti 1021 0.65 SMa1452 hypothetical protein 0.50 SMc03203 Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) (from data) low > 103
Ralstonia solanacearum PSI07 0.58 RPSI07_RS12200 3-hydroxyacyl-CoA dehydrogenase 0.18 RPSI07_RS16530 2-oxo acid dehydrogenase subunit E2 low > 81
Variovorax sp. OAS795 0.58 ABID97_RS10560 3-hydroxyacyl-CoA dehydrogenase 0.56 ABID97_RS06680 dihydrolipoamide acetyltransferase family protein low > 91
Azospirillum sp. SherDot2 0.56 MPMX19_02389 putative oxidoreductase 0.19 MPMX19_01100 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex — —
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_09370 fabG 3-hydroxyacyl-CoA dehydrogenase 0.21 OKGIIK_12595 aceF dihydrolipoyllysine-residue acetyltransferase low > 52
Castellaniella sp019104865 MT123 0.54 ABCV34_RS05365 3-hydroxyacyl-CoA dehydrogenase 0.60 ABCV34_RS04965 dihydrolipoamide acetyltransferase family protein 0.97 7
Marinobacter adhaerens HP15 0.53 HP15_1007 3-hydroxyacyl-CoA dehydrogenase type II 0.53 HP15_64 catalytic domain of components of various dehydrogenase complexes low > 73
Agrobacterium fabrum C58 0.52 Atu1415 3-hydroxyacyl-CoA dehydrogenase type II 0.48 Atu3471 branched-chain alpha-keto acid dehydrogenase subunit E2 low > 89
Mycobacterium tuberculosis H37Rv 0.50 Rv1144 Probable short-chain type dehydrogenase/reductase 0.22 Rv2495c Probable branched-chain keto acid dehydrogenase E2 component BkdC — —
Dinoroseobacter shibae DFL-12 0.50 Dshi_1700 short-chain dehydrogenase/reductase SDR (RefSeq) 0.20 Dshi_2160 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (RefSeq) low > 64
Bosea sp. OAE506 0.46 ABIE41_RS04860 SDR family NAD(P)-dependent oxidoreductase 0.51 ABIE41_RS02475 dihydrolipoamide acetyltransferase family protein low > 77
Sphingomonas koreensis DSMZ 15582 0.39 Ga0059261_2816 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.36 Ga0059261_2271 branched-chain alpha-keto acid dehydrogenase E2 component (EC 2.3.1.168) low > 68

Not shown: 38 genomes with orthologs for PP_2214 only; 3 genomes with orthologs for PP_4403 only