Conservation of cofitness between PP_0165 and PP_4373 in Pseudomonas putida KT2440

15 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Pseudomonas putida KT2440	1.0	PP_0165		GGDEF domain protein	1.0	PP_4373		Transcriptional regulator FleQ	0.58	7
Pseudomonas sp. RS175	0.78	PFR28_04783		hypothetical protein	0.93	PFR28_00828		Anaerobic nitric oxide reductase transcription regulator NorR	0.35	23
Pseudomonas fluorescens FW300-N2C3	0.78	AO356_10580		hypothetical protein	0.93	AO356_03855		AAA family ATPase	0.38	24
Pseudomonas fluorescens FW300-N2E2	0.78	Pf6N2E2_3983		Membrane bound c-di-GMP receptor LapD	0.93	Pf6N2E2_2597		Flagellar regulatory protein FleQ	0.27	36
Pseudomonas fluorescens FW300-N2E3	0.77	AO353_11170		hypothetical protein	0.93	AO353_18660		AAA family ATPase	0.55	6
Pseudomonas fluorescens FW300-N1B4	0.76	Pf1N1B4_1802		Membrane bound c-di-GMP receptor LapD	0.93	Pf1N1B4_3599		Flagellar regulatory protein FleQ	low	> 87
Pseudomonas fluorescens GW456-L13	0.75	PfGW456L13_546		Membrane bound c-di-GMP receptor LapD	0.93	PfGW456L13_4357		Flagellar regulatory protein FleQ	low	> 87
Pseudomonas sp. S08-1	0.56	OH686_20650		Membrane bound c-di-GMP receptor LapD	0.84	OH686_02855		Flagellar regulatory protein FleQ	low	> 80
Pseudomonas stutzeri RCH2	0.51	Psest_1864		diguanylate cyclase (GGDEF) domain	0.78	Psest_1765		Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains	low	> 67
Alteromonas macleodii MIT1002	0.22	MIT1002_01618		Cyclic di-GMP phosphodiesterase Gmr	0.43	MIT1002_01081		Nitrogen assimilation regulatory protein	low	> 70
Marinobacter adhaerens HP15	0.18	HP15_3218		diguanylate cyclase/phosphodiesterase	0.60	HP15_2330		two component, sigma54 specific, transcriptional regulator, Fis family	0.63	32
Vibrio cholerae E7946 ATCC 55056	0.15	CSW01_19490		GGDEF domain-containing protein	0.46	CSW01_10670		sigma-54-dependent Fis family transcriptional regulator	low	> 62
Shewanella oneidensis MR-1	0.15	SO4323		GGDEF domain protein (NCBI ptt file)	0.47	SO3232	flrA	flagellar regulatory protein A (NCBI ptt file)	low	> 76
Shewanella loihica PV-4	0.15	Shew_0307		diguanylate cyclase/phosphodiesterase (RefSeq)	0.46	Shew_1362		sigma-54 dependent trancsriptional regulator (RefSeq)	low	> 60
Shewanella sp. ANA-3	0.14	Shewana3_0376		diguanylate cyclase/phosphodiesterase (RefSeq)	0.47	Shewana3_1338		sigma-54 dependent trancsriptional regulator (RefSeq)	low	> 73
Shewanella amazonensis SB2B	0.14	Sama_3264		putative diguanylate phosphodiesterase (RefSeq)	0.46	Sama_2301		response regulator receiver protein (RefSeq)	0.50	17

Not shown: 15 genomes with orthologs for PP_0165 only; 11 genomes with orthologs for PP_4373 only