Conservation of cofitness between PP_4320 and PP_4250 in Pseudomonas putida KT2440

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4320 cytochrome c-type biogenesis protein 1.0 PP_4250 cytochrome c oxidase subunit I, cbb3-type 0.34 7
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_03620 cytochrome C 0.92 AO356_02405 cytochrome C oxidase Cbb3 0.62 4
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_18890 cytochrome C 0.90 AO353_00585 cytochrome C oxidase Cbb3 0.50 13
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_2552 Cytochrome c heme lyase subunit CcmH 0.92 Pf6N2E2_2305 Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) low > 103
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_4308 Cytochrome c heme lyase subunit CcmH 0.92 PfGW456L13_4056 Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) low > 87
Pseudomonas simiae WCS417 0.69 PS417_08730 cytochrome C 0.94 PS417_20700 cbb3-type cytochrome c oxidase subunit I 0.18 33
Pseudomonas fluorescens SBW25 0.69 PFLU_RS08685 c-type cytochrome biogenesis protein CcmI 0.94 PFLU_RS22320 cytochrome-c oxidase, cbb3-type subunit I low > 109
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS08685 c-type cytochrome biogenesis protein CcmI 0.94 PFLU_RS22320 cytochrome-c oxidase, cbb3-type subunit I 0.47 15
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_3647 Cytochrome c heme lyase subunit CcmH 0.92 Pf1N1B4_3884 Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) low > 87
Pseudomonas sp. RS175 0.69 PFR28_00873 hypothetical protein 0.92 PFR28_01095 Cbb3-type cytochrome c oxidase subunit CcoN1 low > 88
Pseudomonas stutzeri RCH2 0.57 Psest_1762 cytochrome c-type biogenesis protein CcmI 0.91 Psest_2524 cytochrome c oxidase, cbb3-type, subunit I low > 67
Pseudomonas sp. S08-1 0.52 OH686_02620 Cytochrome c heme lyase subunit CcmH 0.90 OH686_02175 cytochrome c oxidase, cbb3-type, subunit I low > 80
Shewanella sp. ANA-3 0.25 Shewana3_0233 TPR repeat-containing protein (RefSeq) 0.80 Shewana3_2107 cytochrome c oxidase, cbb3-type, subunit I (RefSeq) 0.61 16
Shewanella oneidensis MR-1 0.25 SO0265 conserved hypothetical protein (NCBI ptt file) 0.80 SO2364 ccoN cytochrome c oxidase, cbb3-type, subunit I (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.23 Sama_0247 cytochrome c-type biogenesis protein CcmH (RefSeq) 0.80 Sama_1791 cytochrome c oxidase, cbb3-type, subunit I (RefSeq) 0.59 12
Shewanella loihica PV-4 0.22 Shew_0192 TPR repeat-containing protein (RefSeq) 0.80 Shew_1985 cytochrome c oxidase, cbb3-type, subunit I (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.12 CSW01_10250 c-type cytochrome biogenesis protein CcmI 0.79 CSW01_07230 cytochrome-c oxidase, cbb3-type subunit I low > 62
Alteromonas macleodii MIT1002 0.08 MIT1002_00968 Cytochrome c-type biogenesis protein CcmH precursor 0.79 MIT1002_02129 hypothetical protein low > 70

Not shown: 6 genomes with orthologs for PP_4320 only; 26 genomes with orthologs for PP_4250 only