Conservation of cofitness between PP_3926 and PP_2137 in Pseudomonas putida KT2440

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3926 short-chain dehydrogenase 1.0 PP_2137 beta-ketoadipyl CoA thiolase, beta component 0.15 12
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_3499 Short-chain dehydrogenase/reductase SDR 0.95 PfGW456L13_4040 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 87
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_21495 short-chain dehydrogenase 0.95 AO353_00505 3-ketoacyl-CoA thiolase low > 101
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_23325 short-chain dehydrogenase 0.95 AO356_02325 3-ketoacyl-CoA thiolase low > 104
Pseudomonas sp. RS175 0.93 PFR28_02397 3-oxoacyl-[acyl-carrier-protein] reductase FabG 0.96 PFR28_01111 3-ketoacyl-CoA thiolase low > 88
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_544 Short-chain dehydrogenase/reductase SDR 0.93 Pf6N2E2_2289 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) — —
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS17045 SDR family oxidoreductase 0.95 PFLU_RS07655 acetyl-CoA C-acyltransferase FadA low > 109
Pseudomonas fluorescens SBW25 0.93 PFLU_RS17045 SDR family oxidoreductase 0.95 PFLU_RS07655 acetyl-CoA C-acyltransferase FadA low > 109
Pseudomonas simiae WCS417 0.93 PS417_15030 short-chain dehydrogenase 0.94 PS417_07580 3-ketoacyl-CoA thiolase — —
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_4527 Short-chain dehydrogenase/reductase SDR 0.93 Pf1N1B4_3904 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_2456 Short-chain dehydrogenase/reductase SDR 0.95 Psyr_3289 3-ketoacyl-CoA thiolase — —
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_2456 Short-chain dehydrogenase/reductase SDR 0.95 Psyr_3289 3-ketoacyl-CoA thiolase low > 86
Pseudomonas sp. S08-1 0.88 OH686_03515 Oxidoreductase, short-chain dehydrogenase/reductase family 0.93 OH686_21930 acetyl-CoA C-acyltransferase FadA low > 80
Pseudomonas stutzeri RCH2 0.87 Psest_2081 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.90 Psest_2653 fatty oxidation complex, beta subunit FadA — —
Alteromonas macleodii MIT1002 0.68 MIT1002_02274 3-oxoacyl-[acyl-carrier-protein] reductase FabG 0.66 MIT1002_00574 3-ketoacyl-CoA thiolase low > 70
Marinobacter adhaerens HP15 0.67 HP15_825 short-chain dehydrogenase/reductase SDR 0.72 HP15_1513 Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) low > 73
Shewanella loihica PV-4 0.65 Shew_2862 short chain dehydrogenase (RefSeq) 0.66 Shew_0018 fadA 3-ketoacyl-CoA thiolase (RefSeq) low > 60
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS28985 short-chain dehydrogenase 0.35 RR42_RS02515 acetyl-CoA acetyltransferase — —
Pectobacterium carotovorum WPP14 0.30 HER17_RS09865 SDR family oxidoreductase 0.64 HER17_RS20555 acetyl-CoA C-acyltransferase FadA low > 75
Variovorax sp. SCN45 0.29 GFF4970 Oxidoreductase, short-chain dehydrogenase/reductase family 0.38 GFF2768 3-ketoacyl-CoA thiolase 2 [fadN-fadA-fadE operon] (EC 2.3.1.16) low > 127
Rahnella sp. WP5 0.29 EX31_RS06780 glucose 1-dehydrogenase 0.64 EX31_RS14570 acetyl-CoA C-acyltransferase FadA low > 89
Variovorax sp. OAS795 0.28 ABID97_RS15765 SDR family oxidoreductase 0.38 ABID97_RS20240 thiolase family protein low > 91
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF2060 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 0.64 GFF272 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 78

Not shown: 16 genomes with orthologs for PP_3926 only; 30 genomes with orthologs for PP_2137 only