Conservation of cofitness between PP_1230 and PP_1824 in Pseudomonas putida KT2440

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1230 conserved exported protein of unknown function 1.0 PP_1824 Smr domain protein 0.19 15
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_11370 hypothetical protein 0.86 AO353_02280 DNA mismatch repair protein MutS low > 101
Pseudomonas fluorescens SBW25 0.38 PFLU_RS00730 YdgA family protein 0.86 PFLU_RS21310 Smr/MutS family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS00730 YdgA family protein 0.86 PFLU_RS21310 Smr/MutS family protein low > 109
Pseudomonas simiae WCS417 0.38 PS417_00735 hypothetical protein 0.84 PS417_19345 DNA mismatch repair protein MutS — —
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_10805 hypothetical protein 0.87 AO356_19510 DNA mismatch repair protein MutS — —
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_502 GTP-binding protein 0.86 PfGW456L13_4172 Smr domain protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_4033 GTP-binding protein 0.87 Pf6N2E2_5816 Smr domain protein low > 103
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_1746 GTP-binding protein 0.86 Pf1N1B4_3774 Smr domain protein — —
Pseudomonas sp. RS175 0.36 PFR28_04737 Protein YdgA 0.85 PFR28_03132 putative DNA endonuclease SmrA low > 88
Pseudomonas sp. S08-1 0.35 OH686_01915 GTP-binding protein 0.83 OH686_00650 Smr domain protein low > 80
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_5005 protein of unknown function DUF945 0.81 Psyr_1847 Smr protein/MutS2 C-terminal — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_5005 protein of unknown function DUF945 0.81 Psyr_1847 Smr protein/MutS2 C-terminal low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF1809 Putative GTP-binding protein YdgA 0.22 GFF2654 FIG00638524: hypothetical protein low > 78
Escherichia fergusonii Becca 0.18 EFB2_02378 Protein YdgA 0.21 EFB2_02588 putative DNA endonuclease SmrA low > 86
Escherichia coli Nissle 1917 0.18 ECOLIN_RS09010 YdgA family protein 0.22 ECOLIN_RS08040 DNA endonuclease SmrA low > 52
Escherichia coli BW25113 0.17 b1614 ydgA hypothetical protein (NCBI) 0.21 b1340 ydaL hypothetical protein (NCBI) — —
Escherichia coli ECOR38 0.17 HEPCGN_06010 ydgA Protein YdgA 0.21 HEPCGN_25970 smrA DNA endonuclease SmrA low > 85
Escherichia coli BL21 0.17 ECD_01583 DUF945 family protein 0.21 ECD_01317 DNA endonuclease — —
Escherichia coli ECRC98 0.17 JDDGAC_02225 ydgA Protein YdgA 0.21 JDDGAC_04750 smrA DNA endonuclease SmrA — —
Escherichia coli ECRC101 0.17 OKFHMN_27635 ydgA Protein YdgA 0.21 OKFHMN_02190 smrA DNA endonuclease SmrA — —
Escherichia coli ECRC102 0.17 NIAGMN_00440 ydgA Protein YdgA 0.21 NIAGMN_26360 smrA DNA endonuclease SmrA — —
Escherichia coli ECRC99 0.17 KEDOAH_00470 ydgA Protein YdgA 0.21 KEDOAH_26565 smrA DNA endonuclease SmrA — —
Escherichia coli ECRC101 0.17 MCAODC_17775 ydgA Protein YdgA 0.21 MCAODC_16065 smrA DNA endonuclease SmrA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.17 OHPLBJKB_02112 Protein YdgA 0.21 OHPLBJKB_02342 putative DNA endonuclease SmrA low > 73
Escherichia coli ECRC62 0.17 BNILDI_16930 ydgA Protein YdgA 0.21 BNILDI_18055 smrA DNA endonuclease SmrA — —
Pseudomonas stutzeri RCH2 0.17 Psest_0041 Uncharacterized protein conserved in bacteria 0.83 Psest_1993 Uncharacterized protein conserved in bacteria low > 67
Escherichia coli ECOR27 0.17 NOLOHH_18140 ydgA Protein YdgA 0.21 NOLOHH_19905 smrA DNA endonuclease SmrA — —
Klebsiella michiganensis M5al 0.16 BWI76_RS16285 hypothetical protein 0.22 BWI76_RS16155 hypothetical protein — —
Enterobacter sp. TBS_079 0.16 MPMX20_02019 Protein YdgA 0.20 MPMX20_02041 putative DNA endonuclease SmrA low > 85
Enterobacter asburiae PDN3 0.16 EX28DRAFT_1611 Uncharacterized protein conserved in bacteria 0.21 EX28DRAFT_1533 Uncharacterized protein conserved in bacteria low > 76
Serratia liquefaciens MT49 0.15 IAI46_11640 YdgA family protein 0.22 IAI46_19830 DNA endonuclease SmrA low > 86
Erwinia tracheiphila SCR3 0.15 LU632_RS12340 YdgA family protein 0.18 LU632_RS07765 smrB endonuclease SmrB low > 74
Rahnella sp. WP5 0.14 EX31_RS06975 YdgA family protein 0.24 EX31_RS07180 DNA endonuclease SmrA low > 89
Pectobacterium carotovorum WPP14 0.13 HER17_RS10765 YdgA family protein 0.21 HER17_RS06925 endonuclease SmrB low > 75
Dickeya dadantii 3937 0.11 DDA3937_RS10645 YdgA family protein 0.23 DDA3937_RS12085 DNA endonuclease SmrA low > 74
Dickeya dianthicola ME23 0.11 DZA65_RS11115 YdgA family protein 0.23 DZA65_RS12625 DNA endonuclease SmrA low > 75
Dickeya dianthicola 67-19 0.10 HGI48_RS10645 YdgA family protein 0.18 HGI48_RS14540 endonuclease SmrB low > 71

Not shown: 2 genomes with orthologs for PP_1230 only; 16 genomes with orthologs for PP_1824 only