Conservation of cofitness between PP_1229 and PP_1679 in Pseudomonas putida KT2440

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1229 putrescine permease 1.0 PP_1679 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.18 15
Escherichia coli ECOR27 0.64 NOLOHH_20135 puuP putrescine/proton symporter PuuP 0.33 NOLOHH_16045 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.50 61
Escherichia coli BW25113 0.64 b1296 ycjJ putative amino acid/amine transport protein (VIMSS) 0.33 b1991 cobT nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (NCBI) low > 76
Escherichia coli BL21 0.64 ECD_01273 putrescine importer 0.33 ECD_01900 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_02386 Putrescine importer PuuP 0.33 OHPLBJKB_01717 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 73
Escherichia coli ECRC62 0.64 BNILDI_18285 puuP putrescine/proton symporter PuuP 0.33 BNILDI_14875 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 75
Escherichia coli ECRC102 0.64 NIAGMN_26620 puuP putrescine/proton symporter PuuP 0.33 NIAGMN_22640 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Escherichia coli ECRC100 0.64 OKFHMN_02450 puuP putrescine/proton symporter PuuP 0.33 OKFHMN_25135 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 80
Escherichia coli ECRC101 0.64 MCAODC_15820 puuP putrescine/proton symporter PuuP 0.33 MCAODC_20255 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 87
Escherichia coli ECRC99 0.64 KEDOAH_26325 puuP putrescine/proton symporter PuuP 0.33 KEDOAH_02975 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Escherichia coli ECRC98 0.64 JDDGAC_04995 puuP putrescine/proton symporter PuuP 0.33 JDDGAC_29265 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 86
Klebsiella michiganensis M5al 0.63 BWI76_RS10720 putrescine importer 0.33 BWI76_RS23000 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 92
Escherichia coli ECOR38 0.56 HEPCGN_25750 puuP Putrescine importer PuuP 0.33 HEPCGN_03470 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 87
Rahnella sp. WP5 0.56 EX31_RS17890 APC family permease 0.30 EX31_RS09920 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 89
Shewanella oneidensis MR-1 0.55 SO4081 amino acid permease (NCBI ptt file) 0.35 SO1035 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.54 Shewana3_3634 amino acid permease-associated region (RefSeq) 0.37 Shewana3_3278 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (RefSeq) low > 73
Escherichia coli Nissle 1917 0.53 ECOLIN_RS11915 putrescine/proton symporter PlaP 0.33 ECOLIN_RS11620 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 55
Escherichia fergusonii Becca 0.52 EFB2_01842 Low-affinity putrescine importer PlaP 0.33 EFB2_01898 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF3916 Putrescine importer 0.33 GFF3969 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) low > 78
Acinetobacter radioresistens SK82 0.47 MPMX26_00708 Low-affinity putrescine importer PlaP 0.53 MPMX26_01612 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 36
Pseudomonas sp. RS175 0.29 PFR28_01269 Putrescine importer PuuP 0.71 PFR28_03202 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 88
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_5855 Putrescine importer 0.74 Pf1N1B4_3713 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) low > 87
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_27910 porin 0.72 AO353_02605 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 101
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_01520 porin 0.70 AO356_19170 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_2179 Putrescine importer 0.73 Pf6N2E2_5744 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) — —
Pseudomonas syringae pv. syringae B728a 0.11 Psyr_2379 amino acid/polyamine/organocation transporter, APC superfamily 0.71 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.11 Psyr_2379 amino acid/polyamine/organocation transporter, APC superfamily 0.71 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.10 ABZR86_RS06670 amino acid permease 0.51 ABZR86_RS10890 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.06 Echvi_3206 Amino acid transporters 0.37 Echvi_3759 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 79

Not shown: 9 genomes with orthologs for PP_1229 only; 48 genomes with orthologs for PP_1679 only