Conservation of cofitness between PP_2098 and PP_1663 in Pseudomonas putida KT2440

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2098 D-alanyl-D-alanine carboxypeptidase 1.0 PP_1663 conserved exported protein of unknown function 0.49 4
Pseudomonas sp. BP01 0.95 JOY50_RS22085 dacB D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.90 JOY50_RS23930 DUF3108 domain-containing protein low > 84
Pseudomonas sp. SVBP6 0.87 COO64_RS05285 dacB D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.87 COO64_RS07305 DUF3108 domain-containing protein 0.46 18
Pseudomonas sp. RS175 0.83 PFR28_01057 D-alanyl-D-alanine carboxypeptidase DacC 0.78 PFR28_03219 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_02595 D-alanyl-D-alanine carboxypeptidase 0.78 AO356_19080 dehydrogenase low > 104
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_2111 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 0.78 Psyr_3691 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_2111 Peptidase S13, D-Ala-D-Ala carboxypeptidase C 0.78 Psyr_3691 conserved hypothetical protein low > 86
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_2344 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.77 Pf6N2E2_5727 FIG00955360: hypothetical protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_00765 D-alanyl-D-alanine carboxypeptidase 0.73 AO353_02690 dehydrogenase low > 101
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS22535 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.69 PFLU_RS22075 DUF3108 domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.80 PFLU_RS22535 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.69 PFLU_RS22075 DUF3108 domain-containing protein low > 109
Pseudomonas simiae WCS417 0.80 PS417_20920 D-alanyl-D-alanine carboxypeptidase 0.70 PS417_20130 dehydrogenase low > 88
Pseudomonas lactucae CFBP13502 0.79 GEMAOFIL_04329 hypothetical protein 0.70 GEMAOFIL_04219 hypothetical protein low > 96
Pseudomonas orientalis W4I3 0.79 QF045_RS22725 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.69 QF045_RS22225 DUF3108 domain-containing protein low > 93
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_4091 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.79 PfGW456L13_4254 FIG00955360: hypothetical protein low > 87
Pseudomonas sp. DMC3 0.78 GFF5256 D-alanyl-D-alanine carboxypeptidase DacC 0.79 GFF2537 hypothetical protein low > 89
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_3846 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.79 Pf1N1B4_3696 FIG00955360: hypothetical protein low > 87
Pseudomonas aeruginosa PA14 0.73 IKLFDK_15505 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.67 IKLFDK_04250 DUF3108 domain-containing protein low > 98
Pseudomonas aeruginosa PUPa3 0.73 DQ20_RS33855 dacB;go_function=endopeptidase D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.67 DQ20_RS45070 DUF3108 domain-containing protein low > 101
Pseudomonas aeruginosa MRSN321 0.73 DY961_RS01715 dacB;go_function=endopeptidase D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.67 DY961_RS07725 DUF3108 domain-containing protein low > 100
Pseudomonas sp. S08-1 0.73 OH686_03105 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.67 OH686_18985 hypothetical protein 0.82 24
Pseudomonas stutzeri RCH2 0.72 Psest_1950 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family 0.69 Psest_1472 Protein of unknown function (DUF3108). low > 67
Pseudomonas segetis P6 0.70 ACVTMO_RS14980 dacB D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase 0.72 ACVTMO_RS08220 DUF3108 domain-containing protein low > 75
Marinobacter adhaerens HP15 0.41 HP15_829 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.33 HP15_1297 conserved hypothetical protein, secreted low > 73
Shewanella sp. ANA-3 0.11 Shewana3_1985 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (RefSeq) 0.19 Shewana3_2321 hypothetical protein (RefSeq) low > 73

Not shown: 56 genomes with orthologs for PP_2098 only; 9 genomes with orthologs for PP_1663 only