Conservation of cofitness between PP_2347 and PP_0227 in Pseudomonas putida KT2440

20 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Pseudomonas putida KT2440	1.0	PP_2347		DNA-binding response regulator	1.0	PP_0227		periplasmic cystine-binding protein	0.16	12
Pseudomonas fluorescens FW300-N1B4	0.91	Pf1N1B4_105		Two-component system response regulator QseB	0.75	Pf1N1B4_1693		Cystine ABC transporter, periplasmic cystine-binding protein FliY	—	—
Pseudomonas fluorescens FW300-N2C3	0.91	AO356_21280		transcriptional regulator	0.73	AO356_10235		cystine transporter subunit	low	> 104
Pseudomonas fluorescens FW300-N2E2	0.91	Pf6N2E2_41		Two-component system response regulator QseB	0.73	Pf6N2E2_3919		Cystine ABC transporter, periplasmic cystine-binding protein FliY	low	> 103
Pseudomonas sp. RS175	0.90	PFR28_02847		Transcriptional regulatory protein QseB	0.73	PFR28_04855		L-cystine-binding protein FliY	low	> 88
Pseudomonas syringae pv. syringae B728a ΔmexB	0.89	Psyr_3212		Response regulator receiver:Transcriptional regulatory protein, C-terminal	0.73	Psyr_0358		Diaminopimelate-binding protein / L-cystine-binding protein	low	> 86
Pseudomonas syringae pv. syringae B728a	0.89	Psyr_3212		Response regulator receiver:Transcriptional regulatory protein, C-terminal	0.73	Psyr_0358		Diaminopimelate-binding protein / L-cystine-binding protein	low	> 86
Pseudomonas fluorescens GW456-L13	0.89	PfGW456L13_2451		Two-component system response regulator QseB	0.81	PfGW456L13_444		Cystine ABC transporter, periplasmic cystine-binding protein FliY	low	> 87
Pseudomonas fluorescens SBW25	0.89	PFLU_RS10435		response regulator transcription factor	0.71	PFLU_RS01215		cystine ABC transporter substrate-binding protein	low	> 109
Pseudomonas simiae WCS417	0.89	PS417_10270		transcriptional regulator	0.71	PS417_01105		cystine transporter subunit	low	> 88
Pseudomonas fluorescens SBW25-INTG	0.89	PFLU_RS10435		response regulator transcription factor	0.71	PFLU_RS01215		cystine ABC transporter substrate-binding protein	low	> 109
Pseudomonas fluorescens FW300-N2E3	0.88	AO353_19775		transcriptional regulator	0.77	AO353_11675		cystine transporter subunit	low	> 101
Pseudomonas sp. S08-1	0.87	OH686_00055		Two-component system response regulator QseB	0.66	OH686_18905		L-cystine ABC transporter (wide substrate range), substrate-binding protein FliY	low	> 80
Shewanella loihica PV-4	0.51	Shew_0583		two component transcriptional regulator (RefSeq)	0.21	Shew_3166		extracellular solute-binding protein (RefSeq)	low	> 60
Azospirillum sp. SherDot2	0.48	MPMX19_04078		Virulence transcriptional regulatory protein PhoP	0.34	MPMX19_05074		L-cystine-binding protein TcyA	low	> 112
Sinorhizobium meliloti 1021	0.47	SMc00458		transcriptional regulator	0.35	SMc03891		amino acid-binding periplasmic ABC transporter protein	low	> 103
Rhizobium sp. OAE497	0.47	ABIE40_RS05660		response regulator transcription factor	0.33	ABIE40_RS18760		amino acid ABC transporter substrate-binding protein	low	> 107
Castellaniella sp019104865 MT123	0.46	ABCV34_RS15610		response regulator transcription factor	0.33	ABCV34_RS15125		amino acid ABC transporter substrate-binding protein	low	> 48
Caulobacter crescentus NA1000 Δfur	0.44	CCNA_02854		two-component response regulator	0.50	CCNA_01508		cystine-binding protein	low	> 67
Caulobacter crescentus NA1000	0.44	CCNA_02854		two-component response regulator	0.50	CCNA_01508		cystine-binding protein	low	> 66
Vibrio cholerae E7946 ATCC 55056	0.43	CSW01_08235		DNA-binding response regulator	0.28	CSW01_00050		amino acid ABC transporter substrate-binding protein	low	> 62

Not shown: 13 genomes with orthologs for PP_2347 only; 44 genomes with orthologs for PP_0227 only