Conservation of cofitness between PP_2929 and PP_0123 in Pseudomonas putida KT2440

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2929 Carboxynorspermidine/carboxyspermidine decarboxylase 1.0 PP_0123 DNA polymerase I, 5 0.39 6
Pseudomonas simiae WCS417 0.94 PS417_15465 carboxynorspermidine decarboxylase 0.79 PS417_00405 DNA polymerase I low > 88
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_5137 Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) 0.79 Pf1N1B4_1875 DNA polymerase I (EC 2.7.7.7) — —
Pseudomonas sp. RS175 0.94 PFR28_01527 Carboxynorspermidine/carboxyspermidine decarboxylase 0.79 PFR28_04624 DNA polymerase I low > 88
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS17450 carboxynorspermidine decarboxylase 0.77 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas fluorescens SBW25 0.93 PFLU_RS17450 carboxynorspermidine decarboxylase 0.77 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_23420 carboxynorspermidine decarboxylase 0.80 AO356_11465 DNA polymerase I low > 104
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_1606 Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) 0.80 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) low > 103
Pseudomonas stutzeri RCH2 0.90 Psest_1054 Diaminopimelate decarboxylase 0.77 Psest_4219 DNA polymerase I low > 67
Agrobacterium fabrum C58 0.79 Atu4169 carboxynorspermidine decarboxylase 0.41 Atu0110 DNA polymerase I — —
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_08160 carboxynorspermidine decarboxylase 0.61 CSW01_00560 DNA polymerase I low > 62
Desulfovibrio vulgaris Miyazaki F 0.34 DvMF_1532 carboxynorspermidine decarboxylase (RefSeq) 0.25 DvMF_1713 DNA polymerase I (RefSeq) — —
Alteromonas macleodii MIT1002 0.33 MIT1002_03110 Carboxynorspermidine/carboxyspermidine decarboxylase 0.62 MIT1002_00014 DNA polymerase I low > 70
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS14840 carboxynorspermidine decarboxylase 0.39 A4249_RS13840 DNA polymerase I — —
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS03310 carboxynorspermidine decarboxylase 0.35 HMPREF1058_RS11500 DNA polymerase I low > 67
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS01805 carboxynorspermidine decarboxylase 0.36 HMPREF1078_RS06335 DNA polymerase I low > 61
Bacteroides ovatus ATCC 8483 0.29 BACOVA_02371 carboxynorspermidine decarboxylase 0.37 BACOVA_01357 DNA-directed DNA polymerase low > 94
Bacteroides thetaiotaomicron VPI-5482 0.28 BT0674 carboxynorspermidine decarboxylase (NCBI ptt file) 0.36 BT3260 DNA polymerase I (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.28 HMPREF1181_RS16500 carboxynorspermidine decarboxylase 0.36 HMPREF1181_RS02070 DNA polymerase I low > 56
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_0330 carboxynorspermidine decarboxylase (EC 4.1.1.-) 0.35 Ga0059261_2244 DNA polymerase I (EC 2.7.7.7) — —

Not shown: 3 genomes with orthologs for PP_2929 only; 78 genomes with orthologs for PP_0123 only