Conservation of cofitness between PFLU_RS15475 and PFLU_RS24640 in Pseudomonas fluorescens SBW25

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS15475 TetR/AcrR family transcriptional regulator 1.0 PFLU_RS24640 GntR family transcriptional regulator 0.72 3
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS15475 TetR/AcrR family transcriptional regulator 1.00 PFLU_RS24640 GntR family transcriptional regulator low > 109
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_3383 transcriptional regulator, TetR family 0.38 Ga0059261_1638 transcriptional regulator, GntR family low > 68
Sinorhizobium meliloti 1021 0.32 SM_b20455 transcriptional regulator 0.34 SMc02876 transcriptional regulator — —
Dickeya dianthicola 67-19 0.31 HGI48_RS05310 TetR/AcrR family transcriptional regulator 0.16 HGI48_RS16475 GntR family transcriptional regulator low > 71
Enterobacter sp. TBS_079 0.29 MPMX20_01792 HTH-type transcriptional repressor ComR 0.27 MPMX20_03075 HTH-type transcriptional repressor NagR low > 85
Agrobacterium fabrum C58 0.28 Atu3075 TetR family transcriptional regulator 0.38 Atu2606 transcriptional regulator, GntR family 0.32 40
Escherichia coli BW25113 0.28 b1111 ycfQ orf, hypothetical protein (VIMSS) 0.24 b2101 yegW predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli BL21 0.28 ECD_01107 repressor for bhsA(ycfR) 0.24 ECD_02029 putative DNA-binding transcriptional regulator — —
Escherichia coli ECOR27 0.28 NOLOHH_21010 comR TetR family copper-responsive transcriptional repressor ComR 0.24 NOLOHH_15425 yegW Uncharacterized HTH-type transcriptional regulator YegW low > 75
Escherichia coli Nissle 1917 0.28 ECOLIN_RS06410 TetR family copper-responsive transcriptional repressor ComR 0.24 ECOLIN_RS12325 GntR family transcriptional regulator — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_02555 HTH-type transcriptional repressor ComR 0.24 OHPLBJKB_01609 HTH-type transcriptional repressor YvoA low > 73
Escherichia coli ECRC62 0.28 BNILDI_19175 comR TetR family copper-responsive transcriptional repressor ComR 0.24 BNILDI_14340 yegW Uncharacterized HTH-type transcriptional regulator YegW low > 75
Escherichia coli ECRC102 0.28 NIAGMN_24345 comR TetR family copper-responsive transcriptional repressor ComR 0.24 NIAGMN_22030 yegW Uncharacterized HTH-type transcriptional regulator YegW — —
Escherichia coli ECRC99 0.28 KEDOAH_24270 comR TetR family copper-responsive transcriptional repressor ComR 0.24 KEDOAH_04065 yegW Uncharacterized HTH-type transcriptional regulator YegW — —
Escherichia coli ECRC98 0.28 JDDGAC_07145 comR TetR family copper-responsive transcriptional repressor ComR 0.24 JDDGAC_28195 yegW Uncharacterized HTH-type transcriptional regulator YegW low > 86
Escherichia coli ECOR38 0.28 HEPCGN_24000 comR TetR family copper-responsive transcriptional repressor ComR 0.24 HEPCGN_02770 mngR GntR family transcriptional regulator low > 87
Escherichia coli ECRC101 0.28 MCAODC_22845 comR TetR family copper-responsive transcriptional repressor ComR 0.24 MCAODC_21075 yegW Uncharacterized HTH-type transcriptional regulator YegW low > 87
Escherichia coli ECRC100 0.28 OKFHMN_03485 comR TetR family copper-responsive transcriptional repressor ComR 0.24 OKFHMN_24085 yegW Uncharacterized HTH-type transcriptional regulator YegW low > 80
Escherichia fergusonii Becca 0.27 EFB2_02864 HTH-type transcriptional repressor ComR 0.24 EFB2_01756 HTH-type transcriptional repressor NagR low > 86
Enterobacter asburiae PDN3 0.27 EX28DRAFT_1819 transcriptional regulator, TetR family 0.28 EX28DRAFT_0470 Transcriptional regulators low > 76
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_01426 transcriptional regulator, TetR family 0.62 H281DRAFT_04097 transcriptional regulator, GntR family low > 103
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF3394 putative transcriptional repressor 0.25 GFF3835 Uncharacterized HTH-type transcriptional regulator YegW low > 78
Rahnella sp. WP5 0.26 EX31_RS23895 TetR/AcrR family transcriptional regulator 0.19 EX31_RS13550 GntR family transcriptional regulator low > 89
Klebsiella michiganensis M5al 0.26 BWI76_RS11190 putative TetR/AcrR family transcriptional regulatory protein 0.18 BWI76_RS01040 transcriptional regulator low > 92
Paraburkholderia graminis OAS925 0.24 ABIE53_002226 AcrR family transcriptional regulator 0.62 ABIE53_003331 GntR family transcriptional regulator low > 113
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS36215 TetR/AcrR family transcriptional regulator 0.63 QEN71_RS02910 GntR family transcriptional regulator low > 153
Rhizobium sp. OAE497 0.24 ABIE40_RS21315 TetR/AcrR family transcriptional regulator 0.33 ABIE40_RS12115 GntR family transcriptional regulator low > 107
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_28110 TetR family transcriptional regulator 0.85 AO353_04445 GntR family transcriptional regulator low > 101
Bosea sp. OAE506 0.20 ABIE41_RS18905 TetR/AcrR family transcriptional regulator 0.18 ABIE41_RS24190 GntR family transcriptional regulator low > 77
Dinoroseobacter shibae DFL-12 0.17 Dshi_1874 transcriptional regulator, TetR family (RefSeq) 0.11 Dshi_2758 transcriptional regulator, GntR family (RefSeq) low > 64
Dickeya dianthicola ME23 0.15 DZA65_RS22680 TetR/AcrR family transcriptional regulator 0.16 DZA65_RS17560 GntR family transcriptional regulator low > 75

Not shown: 8 genomes with orthologs for PFLU_RS15475 only; 32 genomes with orthologs for PFLU_RS24640 only