Conservation of cofitness between PFLU_RS01530 and PFLU_RS24210 in Pseudomonas fluorescens SBW25

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS01530 ABC transporter permease 1.0 PFLU_RS24210 exodeoxyribonuclease I 0.59 1
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS01530 ABC transporter permease 1.00 PFLU_RS24210 exodeoxyribonuclease I low > 109
Pseudomonas simiae WCS417 0.90 PS417_01490 ABC transporter permease 0.96 PS417_22575 exonuclease I low > 88
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_3857 Arginine ABC transporter, permease protein ArtQ 0.83 Pf6N2E2_5506 Exodeoxyribonuclease I (EC 3.1.11.1) low > 103
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_378 Arginine ABC transporter, permease protein ArtQ 0.83 PfGW456L13_1823 Exodeoxyribonuclease I (EC 3.1.11.1) low > 87
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_1642 Arginine ABC transporter, permease protein ArtQ 0.83 Pf1N1B4_668 Exodeoxyribonuclease I (EC 3.1.11.1) low > 87
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_11990 ABC transporter permease 0.83 AO353_03720 exonuclease I low > 101
Pseudomonas sp. RS175 0.79 PFR28_04913 Arginine ABC transporter permease protein ArtQ 0.82 PFR28_03441 Exodeoxyribonuclease I low > 88
Pseudomonas fluorescens FW300-N2C3 0.79 AO356_09905 ABC transporter for L-Lysine, permease component 1 (from data) 0.83 AO356_17885 exonuclease I low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.76 Psyr_4913 amino acid ABC transporter membrane protein 1, PAAT family 0.78 Psyr_4020 Exodeoxyribonuclease I subunit C low > 86
Pseudomonas syringae pv. syringae B728a 0.76 Psyr_4913 amino acid ABC transporter membrane protein 1, PAAT family 0.78 Psyr_4020 Exodeoxyribonuclease I subunit C low > 86
Pseudomonas putida KT2440 0.74 PP_0281 Amino acid ABC transporter, permease protein 0.74 PP_1365 exodeoxyribonuclease I
Pseudomonas stutzeri RCH2 0.72 Psest_0137 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 0.68 Psest_3180 Exonuclease I low > 67
Pseudomonas sp. S08-1 0.70 OH686_14495 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) 0.72 OH686_18285 Exodeoxyribonuclease I low > 80
Rahnella sp. WP5 0.42 EX31_RS18645 arginine ABC transporter permease ArtQ 0.45 EX31_RS17885 exodeoxyribonuclease I low > 89
Escherichia coli ECRC62 0.41 BNILDI_20540 artQ arginine ABC transporter permease ArtQ 0.42 BNILDI_14790 sbcB exodeoxyribonuclease I low > 75
Escherichia coli BW25113 0.41 b0862 artQ arginine transporter subunit (NCBI) 0.42 b2011 sbcB exonuclease I (NCBI) low > 76
Escherichia coli ECRC98 0.41 JDDGAC_09530 artQ arginine ABC transporter permease ArtQ 0.42 JDDGAC_28675 sbcB exodeoxyribonuclease I low > 86
Escherichia coli Nissle 1917 0.41 ECOLIN_RS04590 arginine ABC transporter permease ArtQ 0.42 ECOLIN_RS11910 exodeoxyribonuclease I
Escherichia coli ECOR38 0.41 HEPCGN_02115 artQ arginine ABC transporter permease ArtQ 0.42 HEPCGN_03270 sbcB exodeoxyribonuclease I low > 87
Escherichia coli BL21 0.41 ECD_00867 arginine ABC transporter permease 0.42 ECD_01914 exodeoxyribonuclease I; exonuclease I low > 61
Escherichia coli ECOR27 0.41 NOLOHH_22285 artQ arginine ABC transporter permease ArtQ 0.42 NOLOHH_15890 sbcB exodeoxyribonuclease I low > 75
Escherichia coli ECRC99 0.41 KEDOAH_22015 artQ arginine ABC transporter permease ArtQ 0.42 KEDOAH_03585 sbcB exodeoxyribonuclease I
Escherichia fergusonii Becca 0.41 EFB2_03199 Arginine ABC transporter permease protein ArtQ 0.42 EFB2_01845 Exodeoxyribonuclease I low > 86
Enterobacter asburiae PDN3 0.41 EX28DRAFT_2089 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 0.42 EX28DRAFT_0545 Exodeoxyribonuclease I subunit C (EC 3.1.11.1) 0.54 17
Escherichia coli ECRC102 0.41 NIAGMN_03940 artQ arginine ABC transporter permease ArtQ 0.42 NIAGMN_22510 sbcB exodeoxyribonuclease I
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_02806 Arginine ABC transporter permease protein ArtQ 0.42 OHPLBJKB_01689 Exodeoxyribonuclease I low > 73
Escherichia coli ECRC100 0.41 OKFHMN_05895 artQ arginine ABC transporter permease ArtQ 0.42 OKFHMN_24565 sbcB exodeoxyribonuclease I low > 80
Escherichia coli ECRC101 0.41 MCAODC_25110 artQ arginine ABC transporter permease ArtQ 0.42 MCAODC_20375 sbcB exodeoxyribonuclease I low > 87
Serratia liquefaciens MT49 0.41 IAI46_08410 arginine ABC transporter permease ArtQ 0.44 IAI46_17150 exodeoxyribonuclease I low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF770 Arginine ABC transporter, permease protein ArtQ 0.43 GFF3917 Exodeoxyribonuclease I (EC 3.1.11.1) low > 78
Enterobacter sp. TBS_079 0.41 MPMX20_01505 Arginine ABC transporter permease protein ArtQ 0.42 MPMX20_02997 Exodeoxyribonuclease I 0.34 33
Klebsiella michiganensis M5al 0.40 BWI76_RS09510 arginine transporter permease subunit ArtQ 0.41 BWI76_RS18785 exodeoxyribonuclease I
Pectobacterium carotovorum WPP14 0.38 HER17_RS12460 arginine ABC transporter permease ArtQ 0.44 HER17_RS12135 exodeoxyribonuclease I low > 75
Erwinia tracheiphila SCR3 0.37 LU632_RS09675 artQ arginine ABC transporter permease ArtQ 0.45 LU632_RS15835 sbcB exodeoxyribonuclease I low > 74

Not shown: 3 genomes with orthologs for PFLU_RS01530 only; 26 genomes with orthologs for PFLU_RS24210 only