Conservation of cofitness between PFLU_RS07240 and PFLU_RS13410 in Pseudomonas fluorescens SBW25

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS07240 sigma factor AlgU regulatory protein MucB 1.0 PFLU_RS13410 AraC family transcriptional regulator 0.60 9
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS07240 sigma factor AlgU regulatory protein MucB 1.00 PFLU_RS13410 AraC family transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.92 PS417_07130 RNA polymerase sigma-H factor AlgU 0.97 PS417_12725 AraC family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_17635 RNA polymerase subunit sigma 0.91 AO353_23885 AraC family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_3325 Sigma factor RpoE negative regulatory protein RseB precursor 0.88 Pf1N1B4_4851 Transcriptional regulator of various polyols utilization, AraC family low > 87
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_4514 Sigma factor RpoE negative regulatory protein RseB precursor 0.90 PfGW456L13_3044 Transcriptional regulator of various polyols utilization, AraC family low > 87
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_04565 RNA polymerase subunit sigma 0.92 AO356_27665 AraC family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_2754 Sigma factor RpoE negative regulatory protein RseB precursor 0.91 Pf6N2E2_811 Transcriptional regulator of various polyols utilization, AraC family low > 103
Pseudomonas sp. RS175 0.70 PFR28_00692 Sigma factor AlgU regulatory protein MucB 0.89 PFR28_01716 HTH-type transcriptional activator RhaS low > 88
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_3956 sigma E regulatory protein, MucB/RseB 0.87 Psyr_2441 transcriptional regulator, AraC family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_3956 sigma E regulatory protein, MucB/RseB 0.87 Psyr_2441 transcriptional regulator, AraC family low > 86
Burkholderia phytofirmans PsJN 0.17 BPHYT_RS14395 sugar dehydratase 0.36 BPHYT_RS16070 AraC family transcriptional regulator low > 109
Paraburkholderia bryophila 376MFSha3.1 0.16 H281DRAFT_04357 sigma E regulatory protein, MucB/RseB 0.36 H281DRAFT_04151 transcriptional regulator, AraC family
Paraburkholderia graminis OAS925 0.16 ABIE53_003041 sigma-E factor negative regulatory protein RseB 0.36 ABIE53_003388 AraC-like DNA-binding protein low > 113
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS04585 MucB/RseB C-terminal domain-containing protein 0.37 QEN71_RS02635 AraC family transcriptional regulator low > 153
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS09635 transcriptional regulator 0.37 HSERO_RS05310 AraC family transcriptional regulator low > 78
Acidovorax sp. GW101-3H11 0.13 Ac3H11_1571 Sigma factor RpoE negative regulatory protein RseB precursor 0.39 Ac3H11_2938 Transcriptional regulator of various polyols utilization, AraC family
Variovorax sp. OAS795 0.12 ABID97_RS08340 MucB/RseB C-terminal domain-containing protein 0.37 ABID97_RS07150 AraC family transcriptional regulator low > 91
Variovorax sp. SCN45 0.12 GFF3865 Sigma factor RpoE negative regulatory protein RseB precursor 0.38 GFF5280 Transcriptional regulator of various polyols utilization, AraC family low > 127

Not shown: 42 genomes with orthologs for PFLU_RS07240 only; 5 genomes with orthologs for PFLU_RS13410 only