Conservation of cofitness between PFLU_RS17345 and PFLU_RS03945 in Pseudomonas fluorescens SBW25

18 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Pseudomonas fluorescens SBW25	1.0	PFLU_RS17345		L,D-transpeptidase family protein	1.0	PFLU_RS03945		type II secretion system F family protein	0.58	7
Pseudomonas fluorescens SBW25-INTG	1.00	PFLU_RS17345		L,D-transpeptidase family protein	1.00	PFLU_RS03945		type II secretion system F family protein	0.19	102
Pseudomonas simiae WCS417	0.92	PS417_15375		peptidoglycan-binding protein	0.83	PS417_03900		type II secretion system protein F	0.21	6
Pseudomonas fluorescens FW300-N2E3	0.67	AO353_29055		peptidoglycan-binding protein	0.65	AO353_14325		type II secretion system protein F	low	> 101
Pseudomonas fluorescens FW300-N2C3	0.60	AO356_26185		peptidoglycan-binding protein	0.62	AO356_16010		type II secretion system protein F	low	> 104
Pseudomonas fluorescens FW300-N2E2	0.60	Pf6N2E2_1111		cell wall degradation protein	0.60	Pf6N2E2_5141		Type IV fimbrial assembly protein PilC	low	> 103
Pseudomonas sp. RS175	0.57	PFR28_01849		hypothetical protein	0.62	PFR28_03732		Type II secretion system protein F	0.26	55
Pseudomonas stutzeri RCH2	0.47	Psest_4007		Uncharacterized protein conserved in bacteria	0.59	Psest_3287		Type II secretory pathway, component PulF	low	> 67
Pseudomonas fluorescens FW300-N1B4	0.33	Pf1N1B4_42		hypothetical protein	0.66	Pf1N1B4_2841		Type IV fimbrial assembly protein PilC	low	> 87
Pseudomonas fluorescens GW456-L13	0.32	PfGW456L13_3972		hypothetical protein	0.65	PfGW456L13_1509		Type IV fimbrial assembly protein PilC	low	> 87
Rhodanobacter sp. FW510-T8	0.32	OKGIIK_00395		Peptidoglycan-binding protein	0.43	OKGIIK_10825	pulF	Type II secretory pathway, component PulF	low	> 52
Rhodanobacter denitrificans MT42	0.31	LRK55_RS05975		L,D-transpeptidase family protein	0.41	LRK55_RS03720		type II secretion system F family protein	low	> 63
Rhodanobacter denitrificans FW104-10B01	0.31	LRK54_RS06230		L,D-transpeptidase family protein	0.41	LRK54_RS03950		type II secretion system F family protein	low	> 59
Marinobacter adhaerens HP15	0.24	HP15_2647		peptidoglycan-binding domain 1 protein	0.51	HP15_2410		type IV pilus biogenesis protein PilC	low	> 73
Shewanella sp. ANA-3	0.21	Shewana3_1674		peptidoglycan binding domain-containing protein (RefSeq)	0.45	Shewana3_0418		type II secretion system protein (RefSeq)	low	> 73
Kangiella aquimarina DSM 16071	0.21	B158DRAFT_1180		Uncharacterized protein conserved in bacteria	0.50	B158DRAFT_2139		Type II secretory pathway, component PulF	low	> 40
Cupriavidus basilensis FW507-4G11	0.20	RR42_RS09545		peptidase	0.42	RR42_RS17985		type II secretion system protein F	low	> 128
Escherichia coli ECRC62	0.18	BNILDI_20215	ldtD	L,D-transpeptidase	0.21	BNILDI_08720	hofC	protein transport protein HofC	low	> 75
Escherichia coli ECRC99	0.18	KEDOAH_22335	ldtD	L,D-transpeptidase	0.21	KEDOAH_17610	hofC	protein transport protein HofC	—	—

Not shown: 21 genomes with orthologs for PFLU_RS17345 only; 38 genomes with orthologs for PFLU_RS03945 only