| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli ECRC100 | 1.0 | OKFHMN_24345 | | GDP-mannose 4,6-dehydratase | 1.0 | OKFHMN_10805 | rluA | bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA | 0.73 | 18 |
| Escherichia fergusonii Becca | 1.00 | EFB2_01801 | | GDP-mannose 4,6-dehydratase | 0.98 | EFB2_03987 | | Dual-specificity RNA pseudouridine synthase RluA | 0.59 | 8 |
| Escherichia coli BW25113 | 1.00 | b2053 | gmd | GDP-D-mannose dehydratase, NAD(P)-binding (NCBI) | 0.99 | b0058 | rluA | pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_03045 | | GDP-mannose 4,6-dehydratase | 0.99 | HEPCGN_08795 | rluA | bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA | low | > 87 |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_22290 | | GDP-mannose 4,6-dehydratase | 1.00 | NIAGMN_08655 | rluA | bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA | — | — |
| Escherichia coli ECRC62 | 1.00 | BNILDI_14585 | | GDP-mannose 4,6-dehydratase | 0.99 | BNILDI_08455 | rluA | bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA | low | > 75 |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_03805 | | GDP-mannose 4,6-dehydratase | 1.00 | KEDOAH_17350 | rluA | bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA | — | — |
| Escherichia coli ECRC101 | 1.00 | MCAODC_20595 | | GDP-mannose 4,6-dehydratase | 1.00 | MCAODC_01320 | rluA | bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA | low | > 87 |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_28455 | | GDP-mannose 4,6-dehydratase | 1.00 | JDDGAC_14400 | rluA | bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA | low | > 86 |
| Escherichia coli BL21 | 1.00 | ECD_01959 | | GDP-D-mannose dehydratase, NAD(P)-binding | 0.99 | ECD_00060 | | dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM-dependent | low | > 61 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_15675 | | GDP-mannose 4,6-dehydratase | 0.99 | NOLOHH_03150 | rluA | bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA | low | > 75 |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS12095 | | GDP-mannose 4,6-dehydratase | 0.99 | ECOLIN_RS00310 | | bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA | low | > 55 |
| Enterobacter asburiae PDN3 | 0.98 | EX28DRAFT_0502 | | GDP-mannose 4,6-dehydratase | 0.90 | EX28DRAFT_3650 | | pseudouridine synthase, RluA family | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.97 | GFF3875 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.95 | GFF184 | | Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.97 | MPMX20_03035 | | GDP-mannose 4,6-dehydratase | 0.89 | MPMX20_00752 | | Dual-specificity RNA pseudouridine synthase RluA | low | > 85 |
| Dickeya dianthicola 67-19 | 0.85 | HGI48_RS18595 | | GDP-mannose 4,6-dehydratase | 0.77 | HGI48_RS18175 | | bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA | low | > 71 |
| Dickeya dianthicola ME23 | 0.84 | DZA65_RS19730 | | GDP-mannose 4,6-dehydratase | 0.77 | DZA65_RS19315 | | bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA | low | > 75 |
| Dickeya dadantii 3937 | 0.84 | DDA3937_RS18665 | | GDP-mannose 4,6-dehydratase | 0.77 | DDA3937_RS18240 | | bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA | low | > 74 |
| Pseudomonas stutzeri RCH2 | 0.84 | Psest_1818 | | GDP-mannose 4,6-dehydratase | 0.45 | Psest_2948 | | pseudouridine synthase, RluA family | low | > 67 |
| Phaeobacter inhibens DSM 17395 | 0.81 | PGA1_65p00310 | | GDP-mannose 4,6-dehydratase Gmd | 0.49 | PGA1_c33080 | | ribosomal large subunit pseudouridine synthase A | low | > 62 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.79 | GFF2554 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.43 | GFF3559 | | Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) | low | > 90 |
| Pectobacterium carotovorum WPP14 | 0.79 | HER17_RS14540 | | GDP-mannose 4,6-dehydratase | 0.77 | HER17_RS02985 | | bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA | low | > 75 |
| Pseudomonas fluorescens SBW25-INTG | 0.78 | PFLU_RS17890 | | GDP-mannose 4,6-dehydratase | 0.45 | PFLU_RS21445 | | RluA family pseudouridine synthase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.78 | PFLU_RS17890 | | GDP-mannose 4,6-dehydratase | 0.45 | PFLU_RS21445 | | RluA family pseudouridine synthase | low | > 109 |
| Dechlorosoma suillum PS | 0.71 | Dsui_0085 | | GDP-mannose 4,6-dehydratase | 0.46 | Dsui_3205 | | pseudouridine synthase, RluA family | low | > 51 |
| Rahnella sp. WP5 | 0.53 | EX31_RS02865 | | GDP-mannose 4,6-dehydratase | 0.69 | EX31_RS03750 | | bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA | low | > 89 |
| Pseudomonas putida KT2440 | 0.47 | PP_1799 | | GDP-mannose 4,6-dehydratase | 0.46 | PP_1731 | | 23S rRNA (746) and tRNA (32) pseudouridine synthase | low | > 96 |
| Pseudomonas syringae pv. syringae B728a | 0.47 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | 0.46 | Psyr_1610 | | ribosomal large subunit pseudouridine synthase A | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.47 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | 0.46 | Psyr_1610 | | ribosomal large subunit pseudouridine synthase A | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.40 | Pf6N2E2_4242 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.45 | Pf6N2E2_5794 | | Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.40 | Pf1N1B4_1965 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.44 | Pf1N1B4_3753 | | Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.40 | AO356_11835 | | GDP-mannose 4,6-dehydratase | 0.45 | AO356_19405 | | pseudouridine synthase | low | > 104 |
| Pseudomonas sp. RS175 | 0.40 | PFR28_04554 | | GDP-mannose 4,6-dehydratase | 0.45 | PFR28_03154 | | Dual-specificity RNA pseudouridine synthase RluA | low | > 88 |
Not shown: 22 genomes with orthologs for OKFHMN_24345 only; 20 genomes with orthologs for OKFHMN_10805 only