Conservation of cofitness between OKFHMN_13555 and OKFHMN_10250 in Escherichia coli ECRC100

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_13555 abgB amidohydrolase 1.0 OKFHMN_10250 cdaR DNA-binding transcriptional regulator CdaR 0.64 10
Escherichia coli ECRC102 1.00 NIAGMN_11305 abgB amidohydrolase 1.00 NIAGMN_08100 cdaR DNA-binding transcriptional regulator CdaR — —
Escherichia coli ECRC101 1.00 MCAODC_04055 abgB amidohydrolase 1.00 MCAODC_00765 cdaR DNA-binding transcriptional regulator CdaR low > 87
Escherichia coli ECRC98 1.00 JDDGAC_17180 abgB amidohydrolase 1.00 JDDGAC_13845 cdaR DNA-binding transcriptional regulator CdaR low > 86
Escherichia coli ECRC99 1.00 KEDOAH_14605 abgB amidohydrolase 1.00 KEDOAH_17905 cdaR DNA-binding transcriptional regulator CdaR — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS22880 M20 aminoacylase family protein 1.00 ECOLIN_RS00900 DNA-binding transcriptional regulator CdaR low > 55
Escherichia fergusonii Becca 0.99 EFB2_04649 Hippurate hydrolase 1.00 EFB2_03882 Carbohydrate diacid regulator low > 86
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS23570 M20 aminoacylase family protein 0.28 QEN71_RS12200 sugar diacid recognition domain-containing protein low > 153
Klebsiella michiganensis M5al 0.55 BWI76_RS12435 putative amino acid amidohydrolase 0.95 BWI76_RS05185 CdaR family transcriptional regulator low > 92
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_29020 amidohydrolase 0.27 AO353_26905 CdaR family transcriptional regulator low > 101
Serratia liquefaciens MT49 0.50 IAI46_17105 amidohydrolase 0.33 IAI46_05255 helix-turn-helix domain-containing protein 0.58 1
Rahnella sp. WP5 0.49 EX31_RS24820 amidohydrolase 0.80 EX31_RS03165 CdaR family transcriptional regulator low > 89
Pectobacterium carotovorum WPP14 0.42 HER17_RS16465 M20 family metallopeptidase 0.82 HER17_RS05665 CdaR family transcriptional regulator low > 75
Dickeya dianthicola 67-19 0.40 HGI48_RS07940 amidohydrolase 0.83 HGI48_RS15995 CdaR family transcriptional regulator low > 71
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_3523 Peptidase M20D, amidohydrolase 0.24 Psyr_3116 transcriptional regulator, CdaR family low > 86
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_3523 Peptidase M20D, amidohydrolase 0.24 Psyr_3116 transcriptional regulator, CdaR family low > 86
Dickeya dadantii 3937 0.39 DDA3937_RS02490 amidohydrolase 0.83 DDA3937_RS15855 CdaR family transcriptional regulator low > 74
Dickeya dianthicola ME23 0.38 DZA65_RS02540 amidohydrolase 0.83 DZA65_RS17080 CdaR family transcriptional regulator low > 75
Pantoea sp. MT58 0.38 IAI47_13285 amidohydrolase 0.83 IAI47_15555 CdaR family transcriptional regulator low > 76
Pseudomonas putida KT2440 0.37 PP_2704 Peptidase, M20/M25/M40 family 0.26 PP_3177 conserved protein of unknown function low > 96
Enterobacter asburiae PDN3 0.31 EX28DRAFT_1051 amidohydrolase 0.95 EX28DRAFT_3751 Sugar diacid utilization regulator low > 76
Enterobacter sp. TBS_079 0.31 MPMX20_02402 N-acetylcysteine deacetylase 0.95 MPMX20_00848 Carbohydrate diacid regulator low > 85
Shewanella sp. ANA-3 0.28 Shewana3_3941 carboxypeptidase (RefSeq) 0.41 Shewana3_2682 CdaR family transcriptional regulator (RefSeq) low > 73
Pseudomonas fluorescens SBW25 0.26 PFLU_RS21460 amidohydrolase 0.29 PFLU_RS14640 CdaR family transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.26 PS417_19495 N-acyl-L-amino acid amidohydrolase 0.29 PS417_13975 CdaR family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS21460 amidohydrolase 0.29 PFLU_RS14640 CdaR family transcriptional regulator low > 109
Shewanella loihica PV-4 0.26 Shew_2688 amidohydrolase (RefSeq) 0.42 Shew_2528 transcriptional regulator, CdaR (RefSeq) low > 60
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.4790.1 N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) 0.48 Xcc-8004.5386.1 Sugar diacid utilization regulator SdaR low > 74

Not shown: 48 genomes with orthologs for OKFHMN_13555 only; 14 genomes with orthologs for OKFHMN_10250 only