Conservation of cofitness between MCAODC_00680 and MCAODC_11915 in Escherichia coli ECRC101

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC101 1.0 MCAODC_00680 skp molecular chaperone Skp 1.0 MCAODC_11915 rseB sigma-E factor regulatory protein RseB 0.80 2
Escherichia coli ECRC102 1.00 NIAGMN_08015 skp molecular chaperone Skp 1.00 NIAGMN_19155 rseB sigma-E factor regulatory protein RseB — —
Escherichia coli ECOR38 1.00 HEPCGN_08120 skp molecular chaperone Skp 1.00 HEPCGN_20530 rseB sigma-E factor regulatory protein RseB — —
Escherichia coli ECRC62 1.00 BNILDI_09160 skp molecular chaperone Skp 1.00 BNILDI_11860 rseB sigma-E factor regulatory protein RseB low > 75
Escherichia coli ECRC100 1.00 OKFHMN_10165 skp molecular chaperone Skp 1.00 OKFHMN_21385 rseB sigma-E factor regulatory protein RseB low > 80
Escherichia coli ECRC98 1.00 JDDGAC_13760 skp molecular chaperone Skp 1.00 JDDGAC_25050 rseB sigma-E factor regulatory protein RseB — —
Escherichia coli ECRC99 1.00 KEDOAH_17990 skp molecular chaperone Skp 1.00 KEDOAH_06835 rseB sigma-E factor regulatory protein RseB — —
Escherichia coli ECOR27 1.00 NOLOHH_02510 skp molecular chaperone Skp 1.00 NOLOHH_13060 rseB sigma-E factor regulatory protein RseB low > 75
Escherichia fergusonii Becca 1.00 EFB2_03866 Chaperone protein Skp 1.00 EFB2_01325 Sigma-E factor regulatory protein RseB 0.68 4
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03485 Chaperone protein Skp 1.00 OHPLBJKB_01136 Sigma-E factor regulatory protein RseB — —
Escherichia coli BL21 1.00 ECD_00176 periplasmic chaperone 1.00 ECD_02465 anti-sigma E factor, binds RseA 0.54 3
Escherichia coli BW25113 1.00 b0178 hlpA periplasmic chaperone (NCBI) 1.00 b2571 rseB periplasmic negative regulator of sigmaE (NCBI) 0.59 4
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00970 molecular chaperone Skp 1.00 ECOLIN_RS14550 sigma-E factor regulatory protein RseB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF44 Outer membrane protein H precursor 0.91 GFF2109 Sigma factor RpoE negative regulatory protein RseB precursor — —
Klebsiella michiganensis M5al 0.91 BWI76_RS05260 chaperone 0.82 BWI76_RS21345 sigma-E factor regulatory protein RseB 0.58 8
Enterobacter sp. TBS_079 0.85 MPMX20_00862 Chaperone protein Skp 0.87 MPMX20_03442 Sigma-E factor regulatory protein RseB — —
Enterobacter asburiae PDN3 0.85 EX28DRAFT_3766 Outer membrane protein 0.87 EX28DRAFT_0074 sigma E regulatory protein, MucB/RseB — —
Dickeya dadantii 3937 0.62 DDA3937_RS05160 molecular chaperone Skp 0.56 DDA3937_RS15755 sigma-E factor regulatory protein RseB low > 74
Dickeya dianthicola ME23 0.62 DZA65_RS05500 molecular chaperone Skp 0.55 DZA65_RS16920 sigma-E factor regulatory protein RseB low > 75
Dickeya dianthicola 67-19 0.62 HGI48_RS05160 molecular chaperone Skp 0.55 HGI48_RS15840 sigma-E factor regulatory protein RseB — —
Pantoea sp. MT58 0.62 IAI47_15485 molecular chaperone Skp 0.66 IAI47_04860 sigma-E factor regulatory protein RseB low > 76
Rahnella sp. WP5 0.60 EX31_RS12990 molecular chaperone Skp 0.64 EX31_RS21810 sigma-E factor regulatory protein RseB — —
Serratia liquefaciens MT49 0.57 IAI46_20215 molecular chaperone Skp 0.68 IAI46_19575 sigma-E factor regulatory protein RseB low > 86
Erwinia tracheiphila SCR3 0.54 LU632_RS19920 skp molecular chaperone Skp 0.66 LU632_RS15415 rseB sigma-E factor regulatory protein RseB — —
Pectobacterium carotovorum WPP14 0.53 HER17_RS16290 molecular chaperone Skp 0.54 HER17_RS05790 sigma-E factor regulatory protein RseB low > 75
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_11465 chaperone protein Skp 0.45 CSW01_12475 sigma-E factor regulatory protein RseB — —
Shewanella sp. ANA-3 0.25 Shewana3_2806 outer membrane chaperone Skp (OmpH) (RefSeq) 0.22 Shewana3_3030 sigma E regulatory protein, MucB/RseB (RefSeq) — —
Shewanella oneidensis MR-1 0.25 SO1638 ompH outer membrane protein OmpH (NCBI ptt file) 0.21 SO1344 rseB sigma-E factor regulatory protein RseB (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.25 Sama_1148 outer membrane protein OmpH (RefSeq) 0.22 Sama_0876 putative sigma E regulatory protein, MucB/RseB (RefSeq) — —
Shewanella loihica PV-4 0.24 Shew_2626 outer membrane chaperone Skp (OmpH) (RefSeq) 0.24 Shew_1050 sigma E regulatory protein, MucB/RseB (RefSeq) — —
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS10920 OmpH 0.14 HSERO_RS09635 transcriptional regulator — —

Not shown: 2 genomes with orthologs for MCAODC_00680 only; 29 genomes with orthologs for MCAODC_11915 only