Conservation of cofitness between MCAODC_14410 and MCAODC_01735 in Escherichia coli ECRC101

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC101 1.0 MCAODC_14410 rsuA 16S rRNA pseudouridine(516) synthase RsuA 1.0 MCAODC_01735 deoB phosphopentomutase 0.61 15
Escherichia fergusonii Becca 1.00 EFB2_01673 Ribosomal small subunit pseudouridine synthase A 1.00 EFB2_04063 Phosphopentomutase low > 86
Escherichia coli ECOR27 1.00 NOLOHH_14935 rsuA 16S rRNA pseudouridine(516) synthase RsuA 1.00 NOLOHH_03550 deoB phosphopentomutase low > 75
Escherichia coli BL21 1.00 ECD_02113 16S rRNA pseudouridine(516) synthase 1.00 ECD_04259 phosphopentomutase low > 61
Escherichia coli ECRC102 1.00 NIAGMN_21125 rsuA 16S rRNA pseudouridine(516) synthase RsuA 1.00 NIAGMN_09070 deoB phosphopentomutase — —
Escherichia coli ECRC100 1.00 OKFHMN_23360 rsuA 16S rRNA pseudouridine(516) synthase RsuA 1.00 OKFHMN_11220 deoB phosphopentomutase low > 80
Escherichia coli ECRC98 1.00 JDDGAC_27320 rsuA 16S rRNA pseudouridine(516) synthase RsuA 1.00 JDDGAC_14815 deoB phosphopentomutase low > 86
Escherichia coli ECRC62 1.00 BNILDI_13855 rsuA 16S rRNA pseudouridine(516) synthase RsuA 1.00 BNILDI_08045 deoB phosphopentomutase low > 75
Escherichia coli ECRC99 1.00 KEDOAH_04825 rsuA 16S rRNA pseudouridine(516) synthase RsuA 1.00 KEDOAH_16930 deoB phosphopentomutase — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS12760 16S rRNA pseudouridine(516) synthase RsuA 1.00 ECOLIN_RS25160 phosphopentomutase — —
Escherichia coli BW25113 1.00 b2183 rsuA 16S rRNA pseudouridylate 516 synthase (NCBI) 1.00 b4383 deoB phosphopentomutase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01526 Ribosomal small subunit pseudouridine synthase A 1.00 OHPLBJKB_03678 Phosphopentomutase low > 73
Escherichia coli ECOR38 0.99 HEPCGN_22625 rsuA 16S rRNA pseudouridine(516) synthase RsuA 1.00 HEPCGN_09225 deoB phosphopentomutase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF3753 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.94 GFF1045 Phosphopentomutase (EC 5.4.2.7) low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_0378 pseudouridine synthase 0.95 EX28DRAFT_3592 phosphopentomutase low > 76
Enterobacter sp. TBS_079 0.90 MPMX20_03149 Ribosomal small subunit pseudouridine synthase A 0.95 MPMX20_00682 Phosphopentomutase low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS19810 16S rRNA pseudouridine(516) synthase 0.94 BWI76_RS04140 phosphopentomutase — —
Pantoea sp. MT58 0.84 IAI47_06585 16S rRNA pseudouridine(516) synthase RsuA 0.84 IAI47_03410 phosphopentomutase low > 76
Serratia liquefaciens MT49 0.83 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA 0.87 IAI46_02920 phosphopentomutase low > 86
Erwinia tracheiphila SCR3 0.82 LU632_RS17595 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.84 LU632_RS02525 deoB phosphopentomutase low > 74
Dickeya dadantii 3937 0.81 DDA3937_RS09160 16S rRNA pseudouridine(516) synthase RsuA 0.84 DDA3937_RS03145 phosphopentomutase — —
Pectobacterium carotovorum WPP14 0.81 HER17_RS12950 16S rRNA pseudouridine(516) synthase RsuA 0.84 HER17_RS18125 phosphopentomutase low > 75
Dickeya dianthicola 67-19 0.80 HGI48_RS09200 16S rRNA pseudouridine(516) synthase RsuA 0.84 HGI48_RS03320 phosphopentomutase — —
Dickeya dianthicola ME23 0.80 DZA65_RS09500 16S rRNA pseudouridine(516) synthase RsuA 0.83 DZA65_RS03315 phosphopentomutase low > 75
Rahnella sp. WP5 0.79 EX31_RS19195 16S rRNA pseudouridine(516) synthase RsuA 0.88 EX31_RS04055 phosphopentomutase low > 89
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_08220 16S rRNA pseudouridine(516) synthase 0.76 CSW01_11900 phosphopentomutase low > 62
Shewanella loihica PV-4 0.54 Shew_2975 pseudouridine synthase (RefSeq) 0.67 Shew_2813 phosphopentomutase (RefSeq) low > 60
Shewanella sp. ANA-3 0.54 Shewana3_0760 ribosomal small subunit pseudouridine synthase A (RefSeq) 0.68 Shewana3_1043 phosphopentomutase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.51 Sama_2614 pseudouridine synthase, Rsu (RefSeq) 0.69 Sama_0975 phosphopentomutase (RefSeq) low > 62
Variovorax sp. SCN45 0.34 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) 0.47 GFF4163 Phosphopentomutase (EC 5.4.2.7) low > 127
Rhodanobacter denitrificans MT42 0.31 LRK55_RS15690 pseudouridine synthase 0.50 LRK55_RS13655 phosphopentomutase low > 63
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS15935 rRNA pseudouridine synthase 0.50 LRK54_RS13935 phosphopentomutase low > 59

Not shown: 31 genomes with orthologs for MCAODC_14410 only; 7 genomes with orthologs for MCAODC_01735 only