Conservation of cofitness between JDDGAC_28300 and JDDGAC_06625 in Escherichia coli ECRC98

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC 1.0 JDDGAC_06625 hflD high frequency lysogenization protein HflD 0.56 18
Escherichia coli ECRC99 1.00 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 KEDOAH_24825 hflD high frequency lysogenization protein HflD — —
Escherichia coli ECRC102 1.00 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 NIAGMN_24885 hflD high frequency lysogenization protein HflD — —
Escherichia coli ECRC101 1.00 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 MCAODC_22345 hflD high frequency lysogenization protein HflD — —
Escherichia coli ECRC100 1.00 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 OKFHMN_00740 hflD high frequency lysogenization protein HflD — —
Escherichia coli ECOR27 1.00 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 NOLOHH_20905 hflD high frequency lysogenization protein HflD low > 75
Escherichia coli BL21 1.00 ECD_01981 multidrug efflux system, subunit C 0.99 ECD_01130 putative lysogenization regulator low > 61
Escherichia coli ECRC62 1.00 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 BNILDI_19070 hflD high frequency lysogenization protein HflD low > 75
Escherichia coli BW25113 0.99 b2076 mdtC multidrug efflux system, subunit C (NCBI) 0.99 b1132 hflD hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01628 Multidrug resistance protein MdtC 0.99 OHPLBJKB_02536 High frequency lysogenization protein HflD low > 73
Escherichia coli ECOR38 0.99 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC 0.99 HEPCGN_24215 hflD high frequency lysogenization protein HflD low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS12205 multidrug efflux RND transporter permease subunit MdtC 0.99 ECOLIN_RS06620 high frequency lysogenization protein HflD — —
Escherichia fergusonii Becca 0.99 EFB2_01779 Multidrug resistance protein MdtC 0.99 EFB2_02843 High frequency lysogenization protein HflD low > 86
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0482 Cation/multidrug efflux pump 0.91 EX28DRAFT_1798 Uncharacterized protein involved in purine metabolism — —
Enterobacter sp. TBS_079 0.91 MPMX20_03062 Multidrug resistance protein MdtC 0.92 MPMX20_01816 High frequency lysogenization protein HflD low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF3853 Multidrug transporter MdtC 0.96 GFF3417 FIG002903: a protein of unknown function perhaps involved in purine metabolism low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS19260 multidrug transporter subunit MdtC 0.91 BWI76_RS11310 lysogenization protein HflD — —
Serratia liquefaciens MT49 0.82 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC 0.73 IAI46_10435 high frequency lysogenization protein HflD low > 86
Pectobacterium carotovorum WPP14 0.79 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC 0.69 HER17_RS11630 high frequency lysogenization protein HflD low > 75
Pantoea sp. MT58 0.79 IAI47_06865 multidrug efflux RND transporter permease subunit MdtC 0.74 IAI47_11920 high frequency lysogenization protein HflD low > 76
Dickeya dianthicola 67-19 0.78 HGI48_RS15350 multidrug efflux RND transporter permease subunit MdtC 0.68 HGI48_RS11535 high frequency lysogenization protein HflD low > 71
Dickeya dadantii 3937 0.78 DDA3937_RS15270 multidrug efflux RND transporter permease subunit MdtC 0.68 DDA3937_RS11490 high frequency lysogenization protein HflD low > 74
Dickeya dianthicola ME23 0.78 DZA65_RS16170 multidrug efflux RND transporter permease subunit MdtC 0.68 DZA65_RS11870 high frequency lysogenization protein HflD low > 75
Erwinia tracheiphila SCR3 0.73 LU632_RS08685 mdtC multidrug efflux RND transporter permease subunit MdtC 0.72 LU632_RS14580 hflD high frequency lysogenization protein HflD low > 74
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_22900 acriflavine resistance protein B 0.31 AO353_27710 DNA repair protein low > 101
Pseudomonas sp. S08-1 0.55 OH686_00930 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) 0.34 OH686_00205 High frequency lysogenization protein HflD low > 80
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_3265 Acriflavin resistance plasma membrane protein 0.31 PfGW456L13_2638 FIG002903: a protein of unknown function perhaps involved in purine metabolism low > 87
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_2484 Acriflavin resistance protein 0.32 Psyr_3191 Protein of unknown function DUF489 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_2484 Acriflavin resistance protein 0.32 Psyr_3191 Protein of unknown function DUF489 low > 86
Pseudomonas stutzeri RCH2 0.53 Psest_2140 Cation/multidrug efflux pump 0.31 Psest_2020 Uncharacterized protein involved in purine metabolism low > 67
Pseudomonas fluorescens SBW25 0.53 PFLU_RS13435 MMPL family transporter 0.31 PFLU_RS18585 high frequency lysogenization protein HflD low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS13435 MMPL family transporter 0.31 PFLU_RS18585 high frequency lysogenization protein HflD low > 109
Rahnella sp. WP5 0.53 EX31_RS13375 MMPL family transporter 0.73 EX31_RS24570 high frequency lysogenization protein HflD low > 89
Pseudomonas putida KT2440 0.52 PP_3583 multidrug efflux transport system - membrane subunit 0.34 PP_4015 HflD-like high frequency lysogenization protein low > 96
Pseudomonas simiae WCS417 0.52 PS417_12750 acriflavine resistance protein B 0.31 PS417_16545 DNA repair protein — —
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_1271 Acriflavin resistance plasma membrane protein 0.31 Pf6N2E2_285 FIG002903: a protein of unknown function perhaps involved in purine metabolism low > 103
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_25880 acriflavine resistance protein B 0.31 AO356_22105 DNA repair protein — —
Pseudomonas sp. RS175 0.51 PFR28_02193 Multidrug resistance protein MdtC 0.32 PFR28_02620 High frequency lysogenization protein HflD low > 88
Acinetobacter radioresistens SK82 0.23 MPMX26_02516 Multidrug resistance protein MdtC 0.15 MPMX26_01047 High frequency lysogenization protein HflD low > 36

Not shown: 25 genomes with orthologs for JDDGAC_28300 only; 15 genomes with orthologs for JDDGAC_06625 only