Conservation of cofitness between IAI47_14515 and IAI47_17985 in Pantoea sp. MT58

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_14515 multidrug efflux RND transporter permease subunit 1.0 IAI47_17985 YjbH domain-containing protein 0.50 16
Erwinia tracheiphila SCR3 0.87 LU632_RS18185 efflux RND transporter permease subunit 0.77 LU632_RS22345 YjbH domain-containing protein — —
Rahnella sp. WP5 0.82 EX31_RS22470 multidrug efflux RND transporter permease subunit 0.68 EX31_RS02945 YjbH domain-containing protein low > 89
Enterobacter asburiae PDN3 0.82 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.74 EX28DRAFT_4314 Bacterial putative lipoprotein (DUF940) low > 76
Enterobacter sp. TBS_079 0.81 MPMX20_01064 Multidrug efflux pump subunit AcrB 0.73 MPMX20_00245 hypothetical protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF4379 RND efflux system, inner membrane transporter CmeB 0.73 GFF1400 YjbH outer membrane lipoprotein low > 78
Escherichia coli Nissle 1917 0.80 ECOLIN_RS02750 efflux RND transporter permease AcrB 0.75 ECOLIN_RS23260 YjbH domain-containing protein low > 52
Escherichia coli ECRC62 0.80 BNILDI_22555 acrB efflux RND transporter permease AcrB 0.75 BNILDI_06210 yjbH Uncharacterized lipoprotein YjbH — —
Escherichia coli BW25113 0.80 b0462 acrB multidrug efflux system protein (NCBI) 0.75 b4029 yjbH predicted porin (NCBI) low > 76
Escherichia coli ECOR38 0.80 HEPCGN_06820 acrB efflux RND transporter permease AcrB 0.75 HEPCGN_11660 yjbH Uncharacterized lipoprotein YjbH low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_03212 Multidrug efflux pump subunit AcrB 0.75 OHPLBJKB_04017 hypothetical protein low > 73
Escherichia fergusonii Becca 0.80 EFB2_03596 Multidrug efflux pump subunit AcrB 0.75 EFB2_04573 hypothetical protein low > 86
Escherichia coli ECOR27 0.80 NOLOHH_01140 acrB efflux RND transporter permease AcrB 0.75 NOLOHH_05310 yjbH Uncharacterized lipoprotein YjbH low > 57
Escherichia coli BL21 0.80 ECD_00413 multidrug efflux system protein 0.74 ECD_03901 DUF940 family extracellular polysaccharide protein low > 60
Escherichia coli ECRC101 0.80 MCAODC_27430 acrB efflux RND transporter permease AcrB 0.75 MCAODC_03645 yjbH Uncharacterized lipoprotein YjbH — —
Escherichia coli ECRC102 0.80 NIAGMN_06260 acrB efflux RND transporter permease AcrB 0.75 NIAGMN_10895 yjbH Uncharacterized lipoprotein YjbH — —
Escherichia coli ECRC99 0.80 KEDOAH_19760 acrB efflux RND transporter permease AcrB 0.75 KEDOAH_15015 yjbH Uncharacterized lipoprotein YjbH — —
Escherichia coli ECRC101 0.80 OKFHMN_08205 acrB efflux RND transporter permease AcrB 0.75 OKFHMN_13145 yjbH Uncharacterized lipoprotein YjbH — —
Dickeya dadantii 3937 0.79 DDA3937_RS05735 multidrug efflux RND transporter permease subunit 0.46 DDA3937_RS06825 YjbH domain-containing protein low > 74
Dickeya dianthicola ME23 0.77 DZA65_RS06115 multidrug efflux RND transporter permease subunit 0.46 DZA65_RS07200 YjbH domain-containing protein low > 75
Dickeya dianthicola 67-19 0.77 HGI48_RS05790 multidrug efflux RND transporter permease subunit 0.46 HGI48_RS06860 YjbH domain-containing protein low > 71
Pectobacterium carotovorum WPP14 0.77 HER17_RS15740 multidrug efflux RND transporter permease subunit 0.49 HER17_RS14485 YjbH domain-containing protein low > 75
Escherichia coli ECRC98 0.69 JDDGAC_19905 mdtF multidrug efflux pump RND permease MdtF 0.75 JDDGAC_16770 yjbH Uncharacterized lipoprotein YjbH — —
Azospirillum brasilense Sp245 0.69 AZOBR_RS30185 multidrug transporter 0.14 AZOBR_RS10610 hypothetical protein low > 97
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_3246 RND efflux system, inner membrane transporter CmeB 0.36 Pf1N1B4_5932 YjbH outer membrane lipoprotein — —
Azospirillum sp. SherDot2 0.68 MPMX19_05884 Multidrug efflux pump subunit AcrB 0.16 MPMX19_01368 hypothetical protein low > 112
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_4581 RND efflux system, inner membrane transporter CmeB 0.35 PfGW456L13_4004 YjbH outer membrane lipoprotein low > 87
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS06805 efflux RND transporter permease subunit 0.35 PFLU_RS17845 YjbH domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.66 PFLU_RS06805 efflux RND transporter permease subunit 0.35 PFLU_RS17845 YjbH domain-containing protein low > 109
Shewanella oneidensis MR-1 0.66 SO4692 AcrB/AcrD/AcrF family protein (NCBI ptt file) 0.41 SO3159 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.66 Shewana3_4045 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) 0.41 Shewana3_1393 protein of unknown function DUF940, membrane lipoprotein putative (RefSeq) low > 73
Dyella japonica UNC79MFTsu3.2 0.62 ABZR86_RS18285 efflux RND transporter permease subunit 0.33 ABZR86_RS18600 YjbH domain-containing protein low > 74
Alteromonas macleodii MIT1002 0.57 MIT1002_00135 Multidrug-efflux transporter MexB 0.42 MIT1002_00053 hypothetical protein 0.61 26
Dinoroseobacter shibae DFL-12 0.13 Dshi_0917 acriflavin resistance protein (RefSeq) 0.19 Dshi_3858 protein of unknown function DUF940 membrane lipoprotein putative (RefSeq) 0.27 45

Not shown: 50 genomes with orthologs for IAI47_14515 only; 1 genomes with orthologs for IAI47_17985 only