Conservation of cofitness between IAI47_02270 and IAI47_08680 in Pantoea sp. MT58

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_02270 large-conductance mechanosensitive channel protein MscL 1.0 IAI47_08680 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.62 12
Enterobacter asburiae PDN3 0.77 EX28DRAFT_0037 large conductance mechanosensitive channel protein 0.67 EX28DRAFT_0721 NOL1/NOP2/sun family putative RNA methylase low > 76
Escherichia coli ECRC99 0.75 KEDOAH_10630 mscL large-conductance mechanosensitive channel protein MscL 0.69 KEDOAH_01665 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF — —
Escherichia coli ECOR38 0.75 HEPCGN_16340 mscL large-conductance mechanosensitive channel protein MscL 0.69 HEPCGN_04840 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF low > 85
Escherichia coli ECRC101 0.75 MCAODC_08040 mscL large-conductance mechanosensitive channel protein MscL 0.69 MCAODC_18965 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_00413 Large-conductance mechanosensitive channel 0.68 OHPLBJKB_01896 Ribosomal RNA small subunit methyltransferase F low > 73
Escherichia coli ECRC102 0.75 NIAGMN_15280 mscL large-conductance mechanosensitive channel protein MscL 0.69 NIAGMN_01620 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF — —
Escherichia coli BW25113 0.75 b3291 mscL large-conductance mechanosensitive channel (NCBI) 0.68 b1835 yebU putative nucleolar proteins (VIMSS) low > 76
Escherichia coli ECRC98 0.75 JDDGAC_21140 mscL large-conductance mechanosensitive channel protein MscL 0.69 JDDGAC_01015 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF — —
Escherichia coli BL21 0.75 ECD_03141 mechanosensitive channel protein, high conductance 0.69 ECD_01806 16S rRNA m(5)C1407 methyltransferase, SAM-dependent — —
Klebsiella michiganensis M5al 0.75 BWI76_RS25690 large-conductance mechanosensitive channel 0.66 BWI76_RS18000 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF low > 92
Escherichia fergusonii Becca 0.75 EFB2_00533 Large-conductance mechanosensitive channel 0.68 EFB2_02166 Ribosomal RNA small subunit methyltransferase F low > 86
Escherichia coli Nissle 1917 0.75 ECOLIN_RS18885 large-conductance mechanosensitive channel protein MscL 0.68 ECOLIN_RS10215 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF — —
Escherichia coli ECRC62 0.75 BNILDI_02210 mscL large-conductance mechanosensitive channel protein MscL 0.69 BNILDI_15745 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF — —
Escherichia coli ECOR27 0.75 NOLOHH_09310 mscL large-conductance mechanosensitive channel protein MscL 0.69 NOLOHH_16950 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF — —
Escherichia coli ECRC101 0.74 OKFHMN_17510 mscL large-conductance mechanosensitive channel protein MscL 0.69 OKFHMN_26440 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF — —
Rahnella sp. WP5 0.71 EX31_RS15995 large-conductance mechanosensitive channel protein MscL 0.62 EX31_RS24855 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF low > 89
Dickeya dadantii 3937 0.71 DDA3937_RS19145 large-conductance mechanosensitive channel protein MscL 0.60 DDA3937_RS11990 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF low > 74
Pectobacterium carotovorum WPP14 0.70 HER17_RS02205 large-conductance mechanosensitive channel protein MscL 0.61 HER17_RS11715 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF low > 75
Dickeya dianthicola 67-19 0.70 HGI48_RS19235 large-conductance mechanosensitive channel protein MscL 0.60 HGI48_RS12080 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF low > 71
Dickeya dianthicola ME23 0.69 DZA65_RS20360 large-conductance mechanosensitive channel protein MscL 0.60 DZA65_RS12530 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF low > 75
Enterobacter sp. TBS_079 0.69 MPMX20_04198 Large-conductance mechanosensitive channel 0.67 MPMX20_02742 Ribosomal RNA small subunit methyltransferase F low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF2388 Large-conductance mechanosensitive channel 0.68 GFF2850 Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) low > 78
Serratia liquefaciens MT49 0.66 IAI46_23285 large-conductance mechanosensitive channel protein MscL 0.62 IAI46_10775 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF low > 86
Shewanella sp. ANA-3 0.62 Shewana3_0520 mscL large-conductance mechanosensitive channel (RefSeq) 0.47 Shewana3_1770 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) low > 73
Shewanella oneidensis MR-1 0.62 SO0522 mscL large conductance mechanosensitive channel protein (NCBI ptt file) 0.47 SO2609 NOL1/NOP2/sun family protein (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.62 CSW01_17275 large conductance mechanosensitive channel protein MscL 0.55 CSW01_07545 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF low > 62
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_0905 large conductance mechanosensitive channel protein 0.46 B158DRAFT_0839 NOL1/NOP2/sun family putative RNA methylase low > 40
Bacteroides ovatus ATCC 8483 0.58 BACOVA_05097 large conductance mechanosensitive channel protein 0.17 BACOVA_00671 NOL1/NOP2/sun family protein low > 94
Bacteroides stercoris CC31F 0.57 HMPREF1181_RS06140 large-conductance mechanosensitive channel protein MscL 0.18 HMPREF1181_RS08100 rRNA cytosine-C5-methyltransferase low > 56
Bacteroides thetaiotaomicron VPI-5482 0.55 BT4264 putative ion channel (NCBI ptt file) 0.18 BT2042 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) low > 81
Echinicola vietnamensis KMM 6221, DSM 17526 0.55 Echvi_2306 large conductance mechanosensitive channel protein 0.17 Echvi_1153 tRNA and rRNA cytosine-C5-methylases low > 79
Phocaeicola dorei CL03T12C01 0.55 ABI39_RS17980 large-conductance mechanosensitive channel protein MscL 0.15 ABI39_RS09930 rRNA cytosine-C5-methyltransferase low > 72
Phocaeicola vulgatus CL09T03C04 0.54 HMPREF1058_RS06045 large-conductance mechanosensitive channel protein MscL 0.16 HMPREF1058_RS14300 rRNA cytosine-C5-methyltransferase low > 67
Mucilaginibacter yixingensis YX-36 DSM 26809 0.54 ABZR88_RS14575 large-conductance mechanosensitive channel protein MscL 0.17 ABZR88_RS00225 RNA methyltransferase low > 71
Pontibacter actiniarum KMM 6156, DSM 19842 0.53 CA264_14480 large-conductance mechanosensitive channel 0.16 CA264_05610 rRNA methyltransferase low > 74
Parabacteroides merdae CL09T00C40 0.53 HMPREF1078_RS10535 large-conductance mechanosensitive channel protein MscL 0.16 HMPREF1078_RS16740 rRNA cytosine-C5-methyltransferase low > 61

Not shown: 55 genomes with orthologs for IAI47_02270 only; 2 genomes with orthologs for IAI47_08680 only