Conservation of cofitness between IAI47_18995 and IAI47_02480 in Pantoea sp. MT58

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_18995 aspartate/glutamate racemase family protein 1.0 IAI47_02480 p-hydroxybenzoic acid efflux pump subunit AaeA 0.25 16
Rahnella sp. WP5 0.66 EX31_RS20045 aspartate/glutamate racemase family protein 0.71 EX31_RS12280 p-hydroxybenzoic acid efflux pump subunit AaeA low > 89
Enterobacter asburiae PDN3 0.64 EX28DRAFT_2918 aspartate racemase 0.77 EX28DRAFT_3292 RND family efflux transporter, MFP subunit 0.54 13
Serratia liquefaciens MT49 0.63 IAI46_18225 aspartate/glutamate racemase family protein 0.73 IAI46_22610 p-hydroxybenzoic acid efflux pump subunit AaeA low > 86
Pseudomonas sp. S08-1 0.63 OH686_18340 Aspartate racemase 0.34 OH686_05780 Tetrapartite efflux system, membrane fusion component FusE-like low > 80
Enterobacter sp. TBS_079 0.63 MPMX20_03707 L-aspartate/glutamate-specific racemase 0.76 MPMX20_04147 p-hydroxybenzoic acid efflux pump subunit AaeA low > 85
Pectobacterium carotovorum WPP14 0.61 HER17_RS15295 aspartate/glutamate racemase family protein 0.69 HER17_RS20110 p-hydroxybenzoic acid efflux pump subunit AaeA low > 75
Escherichia coli ECRC98 0.59 JDDGAC_23600 ygeA amino acid racemase 0.74 JDDGAC_21395 aaeA p-hydroxybenzoic acid efflux pump subunit AaeA — —
Escherichia coli ECRC102 0.59 NIAGMN_17705 ygeA amino acid racemase 0.74 NIAGMN_15530 aaeA p-hydroxybenzoic acid efflux pump subunit AaeA — —
Escherichia coli ECRC99 0.59 KEDOAH_08195 ygeA amino acid racemase 0.74 KEDOAH_10380 aaeA p-hydroxybenzoic acid efflux pump subunit AaeA — —
Escherichia fergusonii Becca 0.59 EFB2_01043 L-aspartate/glutamate-specific racemase 0.75 EFB2_00589 p-hydroxybenzoic acid efflux pump subunit AaeA low > 86
Escherichia coli ECRC101 0.59 MCAODC_10460 ygeA amino acid racemase 0.74 MCAODC_08290 aaeA p-hydroxybenzoic acid efflux pump subunit AaeA — —
Escherichia coli ECOR27 0.59 NOLOHH_11820 ygeA amino acid racemase 0.75 NOLOHH_09570 aaeA p-hydroxybenzoic acid efflux pump subunit AaeA low > 57
Escherichia coli Nissle 1917 0.59 ECOLIN_RS15940 amino acid racemase 0.75 ECOLIN_RS18580 p-hydroxybenzoic acid efflux pump subunit AaeA low > 52
Escherichia coli ECRC62 0.59 BNILDI_10300 ygeA amino acid racemase 0.75 BNILDI_01965 aaeA p-hydroxybenzoic acid efflux pump subunit AaeA — —
Escherichia coli ECOR38 0.59 HEPCGN_19575 ygeA amino acid racemase 0.75 HEPCGN_16635 aaeA p-hydroxybenzoic acid efflux pump subunit AaeA low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_00889 Putative racemase YgeA 0.75 OHPLBJKB_00463 p-hydroxybenzoic acid efflux pump subunit AaeA low > 73
Escherichia coli ECRC101 0.59 OKFHMN_19935 ygeA amino acid racemase 0.74 OKFHMN_17770 aaeA p-hydroxybenzoic acid efflux pump subunit AaeA — —
Rhodanobacter denitrificans FW104-10B01 0.59 LRK54_RS05370 aspartate/glutamate racemase family protein 0.28 LRK54_RS15630 HlyD family secretion protein low > 59
Escherichia coli BL21 0.59 ECD_02688 Asp/Glu_racemase family protein 0.75 ECD_03101 p-hydroxybenzoic acid efflux system component low > 60
Rhodanobacter denitrificans MT42 0.59 LRK55_RS05145 aspartate/glutamate racemase family protein 0.28 LRK55_RS15380 HlyD family secretion protein low > 63
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF1325 Aspartate racemase (EC 5.1.1.13) 0.74 GFF2143 Membrane fusion component of tripartite multidrug resistance system low > 78
Escherichia coli BW25113 0.59 b2840 ygeA predicted racemase (NCBI) 0.75 b3241 aaeA p-hydroxybenzoic acid efflux system component (NCBI) low > 76
Klebsiella michiganensis M5al 0.58 BWI76_RS23370 aspartate/glutamate racemase 0.72 BWI76_RS25450 p-hydroxybenzoic acid efflux subunit AaeA low > 92
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_00459 aspartate racemase 0.31 H281DRAFT_03884 RND family efflux transporter, MFP subunit low > 103
Paraburkholderia graminis OAS925 0.57 ABIE53_002800 aspartate racemase 0.31 ABIE53_004937 multidrug resistance efflux pump low > 113
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS11025 aspartate racemase 0.28 RR42_RS33895 membrane protein low > 128
Pseudomonas simiae WCS417 0.52 PS417_13940 racemase 0.34 PS417_00720 membrane protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS14675 aspartate/glutamate racemase family protein 0.34 PFLU_RS00715 efflux RND transporter periplasmic adaptor subunit low > 109
Pseudomonas fluorescens SBW25 0.50 PFLU_RS14675 aspartate/glutamate racemase family protein 0.34 PFLU_RS00715 efflux RND transporter periplasmic adaptor subunit low > 109
Agrobacterium fabrum C58 0.50 Atu3073 aspartate racemase 0.29 Atu5539 HlyD family secretion protein low > 89
Rhizobium sp. OAE497 0.49 ABIE40_RS11390 aspartate/glutamate racemase family protein 0.33 ABIE40_RS22670 HlyD family secretion protein low > 107
Variovorax sp. OAS795 0.23 ABID97_RS21720 amino acid racemase 0.30 ABID97_RS28465 HlyD family secretion protein — —
Variovorax sp. SCN45 0.21 GFF5866 Aspartate racemase (EC 5.1.1.13) 0.33 GFF4535 Tetrapartite efflux system, membrane fusion component FusE-like low > 127
Dickeya dianthicola 67-19 0.13 HGI48_RS07250 aspartate/glutamate racemase family protein 0.67 HGI48_RS01395 p-hydroxybenzoic acid efflux pump subunit AaeA low > 71
Dickeya dianthicola ME23 0.13 DZA65_RS07760 aspartate/glutamate racemase family protein 0.68 DZA65_RS01455 p-hydroxybenzoic acid efflux pump subunit AaeA low > 75

Not shown: 25 genomes with orthologs for IAI47_18995 only; 7 genomes with orthologs for IAI47_02480 only