Conservation of cofitness between IAI47_18410 and IAI47_01045 in Pantoea sp. MT58

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_18410 diaminopimelate epimerase 1.0 IAI47_01045 HTH-type transcriptional activator IlvY 0.46 11
Erwinia tracheiphila SCR3 0.88 LU632_RS24145 dapF diaminopimelate epimerase 0.87 LU632_RS24390 ilvY HTH-type transcriptional activator IlvY — —
Escherichia coli ECRC101 0.86 OKFHMN_14430 dapF diaminopimelate epimerase 0.74 OKFHMN_14630 ilvY HTH-type transcriptional activator IlvY — —
Escherichia coli BL21 0.86 ECD_03685 diaminopimelate epimerase 0.74 ECD_03651 transcriptional activator of ilvC; autorepressor low > 60
Escherichia coli ECRC101 0.86 MCAODC_04935 dapF diaminopimelate epimerase 0.74 MCAODC_05135 ilvY HTH-type transcriptional activator IlvY — —
Escherichia coli ECRC99 0.86 KEDOAH_13720 dapF diaminopimelate epimerase 0.74 KEDOAH_13520 ilvY HTH-type transcriptional activator IlvY — —
Escherichia coli ECRC102 0.86 NIAGMN_12185 dapF diaminopimelate epimerase 0.74 NIAGMN_12385 ilvY HTH-type transcriptional activator IlvY — —
Escherichia coli ECRC98 0.86 JDDGAC_18055 dapF diaminopimelate epimerase 0.74 JDDGAC_18250 ilvY HTH-type transcriptional activator IlvY — —
Escherichia coli ECRC62 0.86 BNILDI_04975 dapF diaminopimelate epimerase 0.74 BNILDI_04760 ilvY HTH-type transcriptional activator IlvY — —
Escherichia fergusonii Becca 0.86 EFB2_04828 Diaminopimelate epimerase 0.75 EFB2_04863 HTH-type transcriptional regulator HdfR — —
Escherichia coli ECOR27 0.86 NOLOHH_06560 dapF diaminopimelate epimerase 0.74 NOLOHH_06765 ilvY HTH-type transcriptional activator IlvY — —
Escherichia coli BW25113 0.86 b3809 dapF diaminopimelate epimerase (VIMSS) 0.74 b3773 ilvY DNA-binding transcriptional dual regulator (NCBI) — —
Escherichia coli ECOR38 0.86 HEPCGN_13135 dapF diaminopimelate epimerase 0.74 HEPCGN_13340 ilvY HTH-type transcriptional activator IlvY — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.86 OHPLBJKB_04241 Diaminopimelate epimerase 0.74 OHPLBJKB_04280 HTH-type transcriptional regulator GltC — —
Enterobacter sp. TBS_079 0.86 MPMX20_04467 Diaminopimelate epimerase 0.74 MPMX20_04497 HTH-type transcriptional regulator GltC 0.40 28
Escherichia coli Nissle 1917 0.86 ECOLIN_RS21865 diaminopimelate epimerase 0.75 ECOLIN_RS21675 HTH-type transcriptional activator IlvY — —
Enterobacter asburiae PDN3 0.86 EX28DRAFT_4478 diaminopimelate epimerase (EC 5.1.1.7) 0.74 EX28DRAFT_4445 Transcriptional regulator 0.57 17
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF237 Diaminopimelate epimerase (EC 5.1.1.7) 0.74 GFF2897 HTH-type transcriptional regulator IlvY — —
Serratia liquefaciens MT49 0.84 IAI46_00715 diaminopimelate epimerase 0.76 IAI46_24330 HTH-type transcriptional activator IlvY — —
Rahnella sp. WP5 0.84 EX31_RS15155 diaminopimelate epimerase 0.78 EX31_RS15015 HTH-type transcriptional activator IlvY 0.63 17
Pectobacterium carotovorum WPP14 0.83 HER17_RS01340 diaminopimelate epimerase 0.74 HER17_RS01095 HTH-type transcriptional activator IlvY — —
Dickeya dianthicola ME23 0.83 DZA65_RS21100 diaminopimelate epimerase 0.74 DZA65_RS21315 HTH-type transcriptional activator IlvY — —
Dickeya dadantii 3937 0.82 DDA3937_RS19900 diaminopimelate epimerase 0.74 DDA3937_RS20135 HTH-type transcriptional activator IlvY — —
Dickeya dianthicola 67-19 0.82 HGI48_RS20055 diaminopimelate epimerase 0.74 HGI48_RS20275 HTH-type transcriptional activator IlvY — —
Klebsiella michiganensis M5al 0.82 BWI76_RS01200 diaminopimelate epimerase 0.74 BWI76_RS00985 transcriptional regulator IlvY 0.44 2
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_00640 diaminopimelate epimerase 0.48 CSW01_00835 HTH-type transcriptional activator IlvY — —
Shewanella sp. ANA-3 0.70 Shewana3_0391 dapF diaminopimelate epimerase (RefSeq) 0.56 Shewana3_0354 DNA-binding transcriptional regulator IlvY (RefSeq) — —
Alteromonas macleodii MIT1002 0.70 MIT1002_00159 Diaminopimelate epimerase 0.42 MIT1002_04044 HTH-type transcriptional regulator GltC — —
Shewanella oneidensis MR-1 0.70 SO4308 dapF diaminopimelate epimerase (NCBI ptt file) 0.56 SO4350 ilvY transcriptional regulator ilvY (NCBI ptt file) — —
Shewanella loihica PV-4 0.69 Shew_0323 dapF diaminopimelate epimerase (RefSeq) 0.55 Shew_0287 DNA-binding transcriptional regulator IlvY (RefSeq) — —
Shewanella amazonensis SB2B 0.64 Sama_3249 dapF diaminopimelate epimerase (RefSeq) 0.52 Sama_3283 DNA-binding transcriptional regulator IlvY (RefSeq) — —
Pseudomonas stutzeri RCH2 0.55 Psest_3765 diaminopimelate epimerase 0.16 Psest_2671 Transcriptional regulator — —
Pseudomonas sp. S08-1 0.54 OH686_13795 diaminopimelate epimerase 0.42 OH686_08120 Transcriptional regulator IlvY, LysR family — —
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS00365 diaminopimelate epimerase 0.16 QEN71_RS19835 LysR family transcriptional regulator — —
Variovorax sp. SCN45 0.46 GFF4493 Diaminopimelate epimerase (EC 5.1.1.7) 0.18 GFF1571 Transcriptional regulator, LysR family — —

Not shown: 68 genomes with orthologs for IAI47_18410 only; 0 genomes with orthologs for IAI47_01045 only