Conservation of cofitness between IAI47_16965 and IAI47_00030 in Pantoea sp. MT58

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_16965 U32 family peptidase 1.0 IAI47_00030 FadR family transcriptional regulator 0.36 12
Escherichia coli Nissle 1917 0.83 ECOLIN_RS18140 peptidase U32 family protein 0.73 ECOLIN_RS21280 D-galactonate utilization transcriptional regulator DgoR low > 52
Escherichia coli ECRC98 0.83 JDDGAC_21800 protease 0.19 JDDGAC_18335 yieP Uncharacterized HTH-type transcriptional regulator YieP — —
Escherichia coli ECRC99 0.83 KEDOAH_09975 protease 0.19 KEDOAH_13435 yieP Uncharacterized HTH-type transcriptional regulator YieP — —
Escherichia coli BW25113 0.83 b3158 yhbU predicted peptidase (collagenase-like) (NCBI) 0.73 b4479 dgoR predicted DNA-binding transcriptional regulator (NCBI) low > 76
Klebsiella michiganensis M5al 0.83 BWI76_RS24970 peptidase U32 0.75 BWI76_RS27950 transcriptional regulator low > 92
Escherichia coli BL21 0.83 ECD_03025 U32 peptidase family protein 0.73 ECD_03578 D-galactonate catabolism operon transcriptional repressor low > 60
Escherichia coli ECRC101 0.83 MCAODC_08695 protease 0.19 MCAODC_05220 yieP Uncharacterized HTH-type transcriptional regulator YieP — —
Escherichia coli ECOR27 0.83 NOLOHH_09975 ubiU Ubiquinone biosynthesis protein UbiU 0.73 NOLOHH_07195 dgoR D-galactonate utilization transcriptional regulator DgoR low > 57
Escherichia coli ECRC101 0.83 OKFHMN_18175 protease 0.19 OKFHMN_14715 yieP Uncharacterized HTH-type transcriptional regulator YieP — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_00542 putative protease YhbU 0.73 OHPLBJKB_00008 HTH-type transcriptional regulator LutR low > 73
Escherichia coli ECOR38 0.83 HEPCGN_17050 protease 0.73 HEPCGN_13760 dgoR D-galactonate utilization transcriptional regulator DgoR low > 85
Escherichia coli ECRC62 0.83 BNILDI_01555 ubiU Ubiquinone biosynthesis protein UbiU 0.73 BNILDI_04335 dgoR D-galactonate utilization transcriptional regulator DgoR — —
Escherichia coli ECRC102 0.83 NIAGMN_15935 ubiU Ubiquinone biosynthesis protein UbiU 0.19 NIAGMN_12470 yieP Uncharacterized HTH-type transcriptional regulator YieP — —
Escherichia fergusonii Becca 0.83 EFB2_00665 putative protease YhbU 0.73 EFB2_00008 HTH-type transcriptional regulator LutR low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF1510 FIG139552: Putative protease 0.75 GFF1762 D-Galactonate repressor DgoR low > 78
Rahnella sp. WP5 0.80 EX31_RS08480 U32 family peptidase 0.75 EX31_RS10335 D-galactonate utilization transcriptional regulator DgoR low > 89
Dickeya dianthicola 67-19 0.80 HGI48_RS03290 U32 family peptidase 0.75 HGI48_RS06925 D-galactonate utilization transcriptional regulator DgoR low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS03285 U32 family peptidase 0.75 DZA65_RS07270 D-galactonate utilization transcriptional regulator DgoR low > 75
Enterobacter sp. TBS_079 0.79 MPMX20_04062 putative protease YhbU 0.73 MPMX20_00008 HTH-type transcriptional regulator LutR low > 85
Enterobacter asburiae PDN3 0.79 EX28DRAFT_3207 Collagenase and related proteases 0.74 EX28DRAFT_3982 Transcriptional regulators low > 76
Serratia liquefaciens MT49 0.78 IAI46_02015 U32 family peptidase 0.28 IAI46_03180 FadR family transcriptional regulator low > 86
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_5746 FIG139552: Putative protease 0.22 Pf1N1B4_4620 Transcriptional regulator of the arabinose operon in Shewanella, GntR family — —
Pseudomonas sp. RS175 0.64 PFR28_02214 putative protease YhbU 0.22 PFR28_01578 HTH-type transcriptional regulator LutR low > 88
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_25160 protease 0.22 AO356_24580 GntR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_721 FIG139552: Putative protease 0.22 Pf6N2E2_608 Transcriptional regulator of the arabinose operon in Shewanella, GntR family low > 103
Pseudomonas simiae WCS417 0.63 PS417_15755 protease 0.24 PS417_10995 GntR family transcriptional regulator low > 88
Shewanella sp. ANA-3 0.61 Shewana3_1065 peptidase U32 (RefSeq) 0.22 Shewana3_2068 GntR family transcriptional regulator (RefSeq) low > 73
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS08775 protease 0.18 RR42_RS21820 GntR family transcriptional regulator low > 128
Rhodopseudomonas palustris CGA009 0.45 TX73_004810 U32 family peptidase 0.16 TX73_007535 GntR family transcriptional regulator — —
Agrobacterium fabrum C58 0.43 Atu4397 protease 0.19 Atu1788 transcriptional regulator, GntR family low > 89

Not shown: 22 genomes with orthologs for IAI47_16965 only; 17 genomes with orthologs for IAI47_00030 only