Conservation of cofitness between HSERO_RS22670 and HSERO_RS20630 in Herbaspirillum seropedicae SmR1

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS22670 histidine kinase 1.0 HSERO_RS20630 phenylacetic acid degradation protein 0.26 20
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS03295 histidine kinase 0.43 RR42_RS23745 phenylacetic acid degradation protein low > 128
Pseudomonas putida KT2440 0.38 PP_1421 putative Sensor histidine kinase TctE 0.55 PP_3274 ring 1,2-phenylacetyl-CoA epoxidase, reductase subunit low > 96
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_4523 Tricarboxylate transport sensor protein TctE 0.57 PfGW456L13_2423 Phenylacetate-CoA oxygenase/reductase, PaaK subunit low > 87
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_3317 Tricarboxylate transport sensor protein TctE 0.17 Pf1N1B4_2448 GbcB Glycine betaine demethylase subunit B low > 87
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_3964 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal 0.18 Psyr_4775 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_3964 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal 0.18 Psyr_4775 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region low > 86
Pseudomonas sp. S08-1 0.36 OH686_20010 Tricarboxylate transport sensor protein TctE 0.25 OH686_04175 Flavodoxin (ferredoxin-NADPH reductases) family 1 low > 80
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_04605 histidine kinase 0.17 AO356_00630 ferredoxin low > 104
Pseudomonas sp. RS175 0.36 PFR28_00684 Sensor protein QseC 0.17 PFR28_04139 3-ketosteroid-9-alpha-monooxygenase, ferredoxin reductase component low > 88
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_2764 Tricarboxylate transport sensor protein TctE 0.17 Pf6N2E2_4714 GbcB Glycine betaine demethylase subunit B low > 103
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS07165 sensor histidine kinase 0.17 PFLU_RS27860 glycine-betaine demethylase subunit GbcB low > 109
Pseudomonas fluorescens SBW25 0.35 PFLU_RS07165 sensor histidine kinase 0.17 PFLU_RS27860 glycine-betaine demethylase subunit GbcB low > 109
Pseudomonas simiae WCS417 0.35 PS417_07090 histidine kinase 0.17 PS417_26215 ferredoxin low > 88
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_17595 histidine kinase 0.17 AO353_07675 ferredoxin low > 101
Serratia liquefaciens MT49 0.34 IAI46_17865 sensor histidine kinase N-terminal domain-containing protein 0.42 IAI46_16370 phenylacetate-CoA oxygenase/reductase subunit PaaK low > 86
Dickeya dadantii 3937 0.33 DDA3937_RS14480 sensor histidine kinase 0.15 DDA3937_RS09535 NADH oxidoreductase low > 74
Dickeya dianthicola 67-19 0.32 HGI48_RS14450 sensor histidine kinase N-terminal domain-containing protein 0.14 HGI48_RS09550 NADH oxidoreductase low > 71
Dickeya dianthicola ME23 0.32 DZA65_RS15385 sensor histidine kinase 0.14 DZA65_RS09860 NADH oxidoreductase low > 75
Klebsiella michiganensis M5al 0.30 BWI76_RS20025 HAMP domain-containing histidine kinase 0.43 BWI76_RS13110 phenylacetic acid degradation protein low > 92
Enterobacter sp. TBS_079 0.29 MPMX20_03191 Sensor protein QseC 0.45 MPMX20_02146 1,2-phenylacetyl-CoA epoxidase, subunit E low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF1557 Tricarboxylate transport sensor protein TctE 0.12 GFF4910 NADH oxidoreductase hcr (EC 1.-.-.-) low > 78
Azospirillum sp. SherDot2 0.24 MPMX19_04132 Adaptive-response sensory-kinase SasA 0.47 MPMX19_05774 1,2-phenylacetyl-CoA epoxidase, subunit E low > 112
Agrobacterium fabrum C58 0.23 Atu2465 two component sensor kinase 0.18 Atu0727 ferredoxin I low > 89
Sinorhizobium meliloti 1021 0.22 SM_b20721 two-component sensor histidine kinase 0.53 SM_b21636 ferredoxin reductase electron transfer protein low > 103

Not shown: 2 genomes with orthologs for HSERO_RS22670 only; 41 genomes with orthologs for HSERO_RS20630 only