Conservation of cofitness between HSERO_RS18645 and HSERO_RS12550 in Herbaspirillum seropedicae SmR1

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS18645 chemotaxis protein CheY 1.0 HSERO_RS12550 D-lactate dehydrogenase 0.34 4
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS16850 HD domain-containing phosphohydrolase 0.51 ABZR87_RS03505 2-hydroxyacid dehydrogenase low > 80
Ralstonia solanacearum PSI07 0.46 RPSI07_RS05625 two-component system response regulator 0.50 RPSI07_RS09445 2-hydroxyacid dehydrogenase low > 81
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_02781 Response regulator c-di-GMP phosphodiesterase, RpfG family, contains REC and HD-GYP domains 0.55 H281DRAFT_01850 D-lactate dehydrogenase — —
Paraburkholderia graminis OAS925 0.39 ABIE53_006006 adenylate cyclase 0.54 ABIE53_006385 D-lactate dehydrogenase low > 113
Pseudomonas putida KT2440 0.32 PP_2942 Response regulator 0.55 PP_1649 D-lactate dehydrogenase low > 96
Pseudomonas simiae WCS417 0.32 PS417_05440 chemotaxis protein CheY 0.52 PS417_16375 2-hydroxyacid dehydrogenase low > 88
Pseudomonas fluorescens SBW25 0.32 PFLU_RS05525 response regulator 0.50 PFLU_RS18415 2-hydroxyacid dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS05525 response regulator 0.50 PFLU_RS18415 2-hydroxyacid dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_5467 Response regulator 0.54 Pf6N2E2_5719 D-lactate dehydrogenase (EC 1.1.1.28) low > 103
Pseudomonas sp. RS175 0.31 PFR28_03482 Sensor histidine kinase RcsC 0.52 PFR28_03228 D-lactate dehydrogenase low > 88
Pseudomonas sp. S08-1 0.31 OH686_08945 hypothetical protein 0.48 OH686_18940 D-lactate dehydrogenase low > 80
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_17715 chemotaxis protein CheY 0.54 AO356_19040 hydroxyacid dehydrogenase low > 104
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_788 Response regulator 0.53 Pf1N1B4_3500 D-lactate dehydrogenase (EC 1.1.1.28) low > 87
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_16190 chemotaxis protein CheY 0.53 AO353_02740 hydroxyacid dehydrogenase low > 101
Shewanella oneidensis MR-1 0.28 SO2541 response regulator (NCBI ptt file) 0.47 SO0968 ldhA D-lactate dehydrogenase (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_05530 two-component system response regulator 0.47 CSW01_14945 2-hydroxyacid dehydrogenase low > 62
Alteromonas macleodii MIT1002 0.25 MIT1002_03637 Hydrogenase transcriptional regulatory protein hupR1 0.45 MIT1002_01974 D-lactate dehydrogenase low > 70
Dickeya dadantii 3937 0.12 DDA3937_RS10180 response regulator 0.47 DDA3937_RS12295 2-hydroxyacid dehydrogenase low > 74

Not shown: 7 genomes with orthologs for HSERO_RS18645 only; 45 genomes with orthologs for HSERO_RS12550 only